Evidence map›Paper›PMID 22314232›Full record

ArticleThe EMBO journal2012

Palmitoylated calnexin is a key component of the ribosome-translocon complex.

Asvin Kk Lakkaraju, Laurence Abrami, Thomas Lemmin, Sanja Blaskovic, Béatrice Kunz, Akio Kihara, Matteo Dal Peraro, Françoise Gisou van der Goot

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed, 181 citations in OpenAlex.

  1. Review
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  9. TEX38 localizes ZDHHC19 to the plasma membrane and regulates sperm head morphogenesis in mice.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  15. Mechanisms and functions of protein S-acylation.Nature reviews. Molecular cell biology · 2024
    Review
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  18. Article
  19. Article
  20. Review

38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Asvin Kk LakkarajuGlobal Health Institute, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
Laurence Abrami
Thomas Lemmin
Sanja Blaskovic
Béatrice Kunz
Akio Kihara
Matteo Dal Peraro
Françoise Gisou van der Goot
École Polytechnique Fédérale de Lausanne · CHHokkaido University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A third of the human genome encodes N-glycosylated proteins. These are co-translationally translocated into the lumen/membrane of the endoplasmic reticulum (ER) where they fold and assemble before they are transported to their final destination. Here, we show that calnexin, a major ER chaperone involved in glycoprotein folding is palmitoylated and that this modification is mediated by the ER palmitoyltransferase DHHC6. This modification leads to the preferential localization of calnexin to the perinuclear rough ER, at the expense of ER tubules. Moreover, palmitoylation mediates the association of calnexin with the ribosome-translocon complex (RTC) leading to the formation of a supercomplex that recruits the actin cytoskeleton, leading to further stabilization of the assembly. When formation of the calnexin-RTC supercomplex was affected by DHHC6 silencing, mutation of calnexin palmitoylation sites or actin depolymerization, folding of glycoproteins was impaired. Our findings thus show that calnexin is a stable component of the RTC in a manner that is exquisitely dependent on its palmitoylation status. This association is essential for the chaperone to capture its client proteins as they emerge from the translocon, acquire their N-linked glycans and initiate folding.

Indexed as

LipoylationAcyltransferasesCalcium-Binding ProteinsCalnexinCytoskeletonEndoplasmic ReticulumGene SilencingGlycoproteinsHeLa CellsHumansMembrane GlycoproteinsProtein FoldingProtein Processing, Post-TranslationalProtein StabilityReceptors, Cytoplasmic and NuclearReceptors, PeptideAcyltransferasesCalcium-Binding ProteinsCalnexinGlycoproteinsMembrane GlycoproteinsReceptors, Cytoplasmic and NuclearReceptors, Peptidesignal sequence receptorZDHHC6 protein, human

Identifiers

PMID22314232
PMCPMC3321195
OpenAlexW1883864413

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.