Evidence map›Paper›PMID 22312310›Full record

ArticleInternational journal of molecular sciences2012

High-Dimensional descriptor selection and computational QSAR modeling for antitumor activity of ARC-111 analogues Based on Support Vector Regression (SVR).

Wei Zhou, Zhijun Dai, Yuan Chen, Haiyan Wang, Zheming Yuan

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Topoisomerases as anticancer targets.The Biochemical journal · 2018
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Wei ZhouHunan Provincial Key Laboratory of Crop Germplasm Innovation and Utilization, Changsha 410128, China.
Zhijun DaiHunan Provincial Key Laboratory of Crop Germplasm Innovation and Utilization, Changsha 410128, China.
Yuan ChenHunan Provincial Key Laboratory of Crop Germplasm Innovation and Utilization, Changsha 410128, China.
Haiyan WangDepartment of Statistics, Kansas State University, Manhattan, KS 66506, USA.
Zheming YuanHunan Provincial Key Laboratory of Crop Germplasm Innovation and Utilization, Changsha 410128, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To design ARC-111 analogues with improved efficiency, we constructed the QSAR of 22 ARC-111 analogues with RPMI8402 tumor cells. First, the optimized support vector regression (SVR) model based on the literature descriptors and the worst descriptor elimination multi-roundly (WDEM) method had similar generalization as the artificial neural network (ANN) model for the test set. Secondly, seven and 11 more effective descriptors out of 2,923 features were selected by the high-dimensional descriptor selection nonlinearly (HDSN) and WDEM method, and the SVR models (SVR3 and SVR4) with these selected descriptors resulted in better evaluation measures and a more precise predictive power for the test set. The interpretability system of better SVR models was further established. Our analysis offers some useful parameters for designing ARC-111 analogues with enhanced antitumor activity.

Indexed as

Quantitative Structure-Activity RelationshipSupport Vector MachineAntineoplastic AgentsNaphthyridinesNeural Networks, ComputerAntineoplastic AgentsNaphthyridinestopovaleARC-111 analogueshigh-dimensional descriptor selection nonlinearly (HDSN) methodQSARRPMI8402support vector regressionworst descriptor elimination multi-roundly (WDEM) method

Identifiers

PMID22312310
PMCPMC3269744

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.