ArticleJournal of applied physics2012
Fluctuation modes of nanoconfined DNA.
Article in Journal of applied physics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
What it found
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The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
13 citing papers in PubMed.
- Assembly path dependence of telomeric DNA compaction by TRF1, TIN2, and SA1.Biophysical journal · 2023Article
- Single-molecule optical genome mapping in nanochannels: multidisciplinarity at the nanoscale.Essays in biochemistry · 2021Article
- Nanoplumbing with 2D Metamaterials.Small (Weinheim an der Bergstrasse, Germany) · 2019Article
- Modeling the relaxation of internal DNA segments during genome mapping in nanochannels.Biomicrofluidics · 2016Article
- Measurements of DNA barcode label separations in nanochannels from time-series data.Biomicrofluidics · 2015Article
- DNA Brushing Shoulders: Targeted Looping and Scanning of Large DNA Strands.Nano letters · 2015Article
- Collapse of DNA under alternating electric fields.Physical review. E, Statistical, nonlinear, and soft matter physics · 2015Article
- Interference of ATP with the fluorescent probes YOYO-1 andYOYO-3 modifies the mechanical properties of intercalator-stained DNA confined in nanochannels.Mikrochimica acta · 2015Article
- Evaluation of the Kirkwood approximation for the diffusivity of channel-confined DNA chains in the de Gennes regime.Biomicrofluidics · 2015Article
- Probing transient protein-mediated DNA linkages using nanoconfinement.Biomicrofluidics · 2014Article
- SENSING DNA WITH ALTERNATING CURRENTS USING A NANOGAP SENSOR EMBEDDED IN A NANOCHANNEL DEVICE.Nano LIFE · 2013Article
- Chromatin modification mapping in nanochannels.Biomicrofluidics · 2013Article
- Modeling the relaxation time of DNA confined in a nanochannel.Biomicrofluidics · 2013Article
Corrections and comments
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Authors and funding
6 authors.
Funding
Abstract
We report an experimental investigation of the magnitude of length and density fluctuations in DNA that has been stretched in nanofluidic channels. We find that the experimental data can be described using a one-dimensional overdamped oscillator chain with nonzero equilibrium spring length and that a chain of discrete oscillators yields a better description than a continuous chain. We speculate that the scale of these discrete oscillators coincides with the scale at which the finite extensibility of the polymer manifests itself. We discuss how the measurement process influences the apparent measured dynamic properties, and outline requirements for the recovery of true physical quantities.
Identifiers
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.