Evidence map›Paper›PMID 22311636›Full record

ArticleMolecular & cellular proteomics : MCP2012

Advancing cell biology through proteomics in space and time (PROSPECTS).

Angus I Lamond, Mathias Uhlen, Stevan Horning, Alexander Makarov, Carol V Robinson, Luis Serrano, F Ulrich Hartl, Wolfgang Baumeister, Anne Katrin Werenskiold, Jens S Andersen and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 64 citations in OpenAlex.

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  13. PEIMAN 1.0: Post-translational modification Enrichment, Integration and Matching ANalysis.Database : the journal of biological databases and curation · 2015
    Article
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  16. Glycopeptide capture for cell surface proteomics.Journal of visualized experiments : JoVE · 2014
    Article
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 11 institutions in 7 countries.

Angus I LamondCentre for Gene Regulation & Expression, College of Life Sciences, University of Dundee, Dundee DD1 5EH United Kingdom. a.i.lamond@dundee.ac.uk
Mathias Uhlen
Stevan Horning
Alexander Makarov
Carol V Robinson
Luis Serrano
F Ulrich Hartl
Wolfgang Baumeister
Anne Katrin Werenskiold
Jens S Andersen
Ole Vorm
Michal Linial
Ruedi Aebersold
Matthias Mann
Max Planck Institute of Biochemistry · DEMax Planck Institute of Neurobiology · DEThermo Fisher Scientific (Germany) · DEETH Zurich · CHHebrew University of Jerusalem · ILInstitució Catalana de Recerca i Estudis Avançats · ESScience for Life Laboratory · SEThermo Fisher Scientific (Denmark) · DKUniversity of Dundee · GBUniversity of Oxford · GBUniversity of Southern Denmark · DK

Funding

Wellcome Trust 073980
6 · The paper itself

Abstract

The term "proteomics" encompasses the large-scale detection and analysis of proteins and their post-translational modifications. Driven by major improvements in mass spectrometric instrumentation, methodology, and data analysis, the proteomics field has burgeoned in recent years. It now provides a range of sensitive and quantitative approaches for measuring protein structures and dynamics that promise to revolutionize our understanding of cell biology and molecular mechanisms in both human cells and model organisms. The Proteomics Specification in Time and Space (PROSPECTS) Network is a unique EU-funded project that brings together leading European research groups, spanning from instrumentation to biomedicine, in a collaborative five year initiative to develop new methods and applications for the functional analysis of cellular proteins. This special issue of Molecular and Cellular Proteomics presents 16 research papers reporting major recent progress by the PROSPECTS groups, including improvements to the resolution and sensitivity of the Orbitrap family of mass spectrometers, systematic detection of proteins using highly characterized antibody collections, and new methods for absolute as well as relative quantification of protein levels. Manuscripts in this issue exemplify approaches for performing quantitative measurements of cell proteomes and for studying their dynamic responses to perturbation, both during normal cellular responses and in disease mechanisms. Here we present a perspective on how the proteomics field is moving beyond simply identifying proteins with high sensitivity toward providing a powerful and versatile set of assay systems for characterizing proteome dynamics and thereby creating a new "third generation" proteomics strategy that offers an indispensible tool for cell biology and molecular medicine.

Indexed as

Cell BiologyHumansMass SpectrometryProtein Processing, Post-TranslationalProteomeProteomicsTime FactorsProteome

Identifiers

PMID22311636
PMCPMC3316737
OpenAlexW2116160897

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.