Evidence map›Paper›PMID 22308400›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

RNA virus microRNA that mimics a B-cell oncomiR.

Rodney P Kincaid, James M Burke, Christopher S Sullivan

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 166 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
166citing papers in PubMed, 1 pooled it
14.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

166 citing papers in PubMed, 1 synthesis or guideline pooled it, 257 citations in OpenAlex.

  1. Pooled it
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  5. Review
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  7. Article
  8. Article
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  15. Review
  16. BLV-miR-B1-5p PromotesAnimals : an open access journal from MDPI · 2023
    Article
  17. Article
  18. Viral miRNA regulation of host gene expression.Seminars in cell & developmental biology · 2023
    Review
  19. Review
  20. Review

106 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Rodney P KincaidDepartment of Molecular Genetics and Microbiology, University of Texas, Austin, TX 78712-0162, USA.
James M Burke
Christopher S Sullivan
The University of Texas at Austin · US

Funding

Role of microRNAs in the SV40 infectious cycleR01AI077746 · NIAID · UNIVERSITY OF TEXAS AT AUSTIN · PI SULLIVAN, CHRISTOPHER S. · 2009 to 2012
$1.1M
NIAID NIH HHS R01 AI077746NIAID NIH HHS R01AI077746PHS HHS RP110098
6 · The paper itself

Abstract

MicroRNAs (miRNAs) are small RNAs that play a regulatory role in numerous and diverse eukaryotic cellular processes. Virus-encoded miRNAs have garnered much interest, although the functions of most remain to be deciphered. To date, readily detectable, evolutionarily conserved natural miRNAs have only been identified from viruses with DNA genomes. Combined with the fact that most miRNAs are generated from endonucleolytic cleavage of longer transcripts, this finding has led to a common conception that naturally occurring RNA viruses will not encode miRNAs to avoid unproductive cleavage of their genomes or mRNAs. Here we demonstrate that the bovine leukemia virus (BLV), a retrovirus with an RNA genome, encodes a conserved cluster of miRNAs that are transcribed by RNA polymerase III (pol III). Thus, the BLV miRNAs avoid the conundrum of genome/mRNA cleavage because only the subgenomic pol III transcripts are efficiently processed into miRNAs. BLV infection is strongly associated with B-cell tumors in cattle. Because most cells in BLV-associated tumors express little viral mRNAs or proteins, exactly how BLV contributes to tumorigenesis has remained a decades-long unsolved mystery. One BLV miRNA, BLV-miR-B4, shares partial sequence identity and shared common targets with the host miRNA, miR-29. As miR-29 overexpression is associated with B-cell neoplasms that resemble BLV-associated tumors, our findings suggest a possible mechanism contributing to BLV-induced tumorigenesis.

Indexed as

AnimalsBase SequenceBlotting, NorthernB-LymphocytesCattleComputational BiologyHEK293 CellsHumansLeukemia Virus, BovineMicroRNAsMolecular Sequence DataNeoplasmsRibonuclease IIIRNA Polymerase IIIRNA Processing, Post-TranscriptionalTranscription, GeneticDROSHA protein, humanMicroRNAsRibonuclease IIIRNA Polymerase III

Identifiers

PMID22308400
PMCPMC3286953
OpenAlexW2017324476

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.