Evidence map›Paper›PMID 22307549›Full record

ArticleCurrent protocols in microbiology2012

Laboratory maintenance of Agrobacterium.

Elise R Morton, Clay Fuqua

Abstract read
In one paragraph

Article in Current protocols in microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.2field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
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  4. Control of biofilm formation by anProceedings of the National Academy of Sciences of the United States of America · 2024
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  16. Conformation and dynamic interactions of the multipartite genome inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Elise R MortonDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Clay Fuqua
Indiana University Bloomington · US

Funding

Synthesis and function of a unipolar expolysaccharide in AgrobacteriumR01GM080546 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI FUQUA, WILLIAM C · 2007 to 2011
$1.3M
Ecological dynamics of facultative bacterial pathogensR01GM092660 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI BEVER, JAMES DAVID · 2010 to 2013
$836k
NIGMS NIH HHS GM080546NIGMS NIH HHS GM092660NIGMS NIH HHS R01 GM080546NIGMS NIH HHS R01 GM092660
6 · The paper itself

Abstract

Agrobacterium species are plant-associated relatives of the rhizobia. Several species cause plant diseases such as crown gall and hairy root, although there are also avirulent species. A. tumefaciens is the most intensively studied species and causes crown gall, a neoplastic disease that occurs on a variety of plants. Virulence is specified by large plasmids, and in the case of A. tumefaciens this is called the Ti (tumor-inducing) plasmid. During pathogenesis, virulent agrobacteria copy a segment of the Ti plasmid and transfer it to the plant, where it subsequently integrates into the plant genome and expresses genes that result in the disease symptoms. A. tumefaciens has been used extensively as a plant genetic engineering tool, and is also a model microorganism that has been well studied for host-microbe associations, horizontal gene transfer, cell-cell communication, and biofilm formation. This unit describes standard protocols for laboratory cultivation of A. tumefaciens.

Indexed as

Agrobacterium tumefaciensBacteriological TechniquesMaintenancePlant DiseasesPlantsPlant Tumor-Inducing PlasmidsVirulence FactorsVirulence Factors

Identifiers

PMID22307549
PMCPMC3350319
OpenAlexW1887365968

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.