Evidence map›Paper›PMID 22306650›Full record

SynthesisNature genetics2012

Common variants at 11p13 are associated with susceptibility to tuberculosis.

Thorsten Thye, Ellis Owusu-Dabo, Fredrik O Vannberg, Reinout van Crevel, James Curtis, Edhyana Sahiratmadja, Yanina Balabanova, Christa Ehmen, Birgit Muntau, Gerd Ruge and 14 more

Abstract readMeta-Analysis
In one paragraph

Synthesis in Nature genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 123 papers, 9 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
123citing papers in PubMed, 9 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

123 citing papers in PubMed, 9 syntheses or guidelines pooled it.

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63 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Thorsten ThyeDepartment of Molecular Medicine, Bernhard Nocht Institute for Tropical Medicine, Hamburg, Germany.
Ellis Owusu-Dabo
Fredrik O Vannberg
Reinout van Crevel
James Curtis
Edhyana Sahiratmadja
Yanina Balabanova
Christa Ehmen
Birgit Muntau
Gerd Ruge
Jürgen Sievertsen
John Gyapong
Vladyslav Nikolayevskyy
Philip C Hill
Giorgio Sirugo
Francis Drobniewski
Esther van de Vosse
Melanie Newport
Bachti Alisjahbana
Sergey Nejentsev
Tom H M Ottenhoff
Adrian V S Hill
Rolf D Horstmann
Christian G Meyer

Funding

Medical Research Council G0000690Wellcome Trust 088838Wellcome Trust 088838/Z/09/ZWellcome Trust 090532Wellcome Trust 095198
6 · The paper itself

Abstract

After imputation of data from the 1000 Genomes Project into a genome-wide dataset of Ghanaian individuals with tuberculosis and controls, we identified a resistance locus on chromosome 11p13 downstream of the WT1 gene (encoding Wilms tumor 1). The strongest signal was obtained at the rs2057178 SNP (P = 2.63 × 10(-9)). Replication in Gambian, Indonesian and Russian tuberculosis case-control study cohorts increased the significance level for the association with this SNP to P = 2.57 × 10(-11).

Indexed as

Case-Control StudiesCell Cycle ProteinsChromosomes, Human, Pair 11Cohort StudiesGenetic Predisposition to DiseaseGenetic VariationGenotypeGhanaHumansModels, GeneticNuclear ProteinsPolymorphism, Single NucleotideRNA Splicing FactorsTuberculosisCell Cycle ProteinsNuclear ProteinsRNA Splicing FactorsWTAP protein, human

Identifiers

PMID22306650
PMCPMC3427019

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.