Evidence map›Paper›PMID 22306284›Full record

ReviewBiochimica et biophysica acta2012

Metabolic remodeling in iron-deficient fungi.

Caroline C Philpott, Sébastien Leidgens, Avery G Frey

Abstract readReview
In one paragraph

Review in Biochimica et biophysica acta, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 107 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Iron necessity for chlamydospore germination in Fusarium oxysporum f. sp. cubense TR4.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2023
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Regulation of Copper Metabolism by Nitrogen Utilization inJournal of fungi (Basel, Switzerland) · 2021
    Article
  13. Yeast optimizes metal utilization based on metabolic network and enzyme kinetics.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  14. Function Analysis ofFrontiers in fungal biology · 2021
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Iron Regulatory Mechanisms inFrontiers in microbiology · 2020
    Review
  20. Zinc-dependent activation of the Pho8 alkaline phosphatase inThe Journal of biological chemistry · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Caroline C PhilpottGenetics and Metabolism Section, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bldg. 10, Rm. 9B-16, 10 Center Drive, Bethesda, MD 20892, USA. carolinep@intra.niddk.nih.gov
Sébastien Leidgens
Avery G Frey
National Institutes of Health · US

Funding

Identification of human genes of iron homeostasisZIADK054510 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI PHILPOTT, CAROLINE · 2009 to 2025
$27.6M
Eukaryotic Heme UtilizationZIADK054513 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI PHILPOTT, CAROLINE · 2009 to 2015
$1.7M
The Cellular Response To Iron Starvation And IntoxicationZIADK054507 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI PHILPOTT, CAROLINE · 2009 to 2010
$423k
Intramural NIH HHS ZIA DK054507Intramural NIH HHS ZIA DK054513
6 · The paper itself

Abstract

Eukaryotic cells contain dozens, perhaps hundreds, of iron-dependent proteins, which perform critical functions in nearly every major cellular process. Nutritional iron is frequently available to cells in only limited amounts; thus, unicellular and higher eukaryotes have evolved mechanisms to cope with iron scarcity. These mechanisms have been studied at the molecular level in the model eukaryotes Saccharomyces cerevisiae and Schizosaccharomyces pombe, as well as in some pathogenic fungi. Each of these fungal species exhibits metabolic adaptations to iron deficiency that serve to reduce the cell's reliance on iron. However, the regulatory mechanisms that accomplish these adaptations differ greatly between fungal species. This article is part of a Special Issue entitled: Cell Biology of Metals.

Indexed as

Gene Expression Regulation, FungalIron DeficienciesAdaptation, PhysiologicalCytosolFungal ProteinsHemeHumansIronMetabolomeMitochondriaSaccharomyces cerevisiaeSchizosaccharomycesSpecies SpecificityFungal ProteinsHemeIron

Identifiers

PMID22306284
PMCPMC3348335
OpenAlexW2061857306

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.