Evidence map›Paper›PMID 22305165›Full record

ReviewCurrent topics in developmental biology2012

Transcriptional switches direct plant organ formation and patterning.

Miguel A Moreno-Risueno, Jaimie M Van Norman, Philip N Benfey

Abstract readReview
In one paragraph

Review in Current topics in developmental biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
13.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The DOF Transcription FactorFrontiers in plant science · 2019
    Article
  6. Article
  7. Review
  8. microRNA biogenesis, degradation and activity in plants.Cellular and molecular life sciences : CMLS · 2015
    Review
  9. Review
  10. Reconstruction of protein networks from an atlas of maize seed proteotypes.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  11. Article
  12. Article
  13. Root apex transition zone as oscillatory zone.Frontiers in plant science · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Miguel A Moreno-RisuenoDepartment of Biology and Duke Center for Systems Biology, Duke University, Durham, North Carolina, USA.
Jaimie M Van Norman
Philip N Benfey
Duke University · US

Funding

MOLECULAR GENETIC ANALYSIS OF ROOT MORPHOGENESISR01GM043778 · NIGMS · ROCKEFELLER UNIVERSITY · PI BENFEY, PHILIP N · 1991 to 2017
$5.4M
NIGMS NIH HHS R01 GM043778
6 · The paper itself

Abstract

Development of multicellular organisms requires specification of diverse cell types. In plants, development is continuous and because plant cells are surrounded by rigid cell walls, cell division and specification of daughter cell fate must be carefully orchestrated. During embryonic and postembryonic plant development, the specification of cell types is determined both by positional cues and cell lineage. The establishment of distinct transcriptional domains is a fundamental mechanism for determining different cell fates. In this review, we focus on four examples from recent literature of switches operating in cell fate decisions that are regulated by transcriptional mechanisms. First, we highlight a transcriptional mechanism involving a mobile transcription factor in formation of the two ground tissue cell types in roots. Specification of vascular cell types is then discussed, including new details about xylem cell-type specification via a mobile microRNA. Next, transcriptional regulation of two key embryonic developmental events is considered: establishment of apical-basal polarity in the single-celled zygote and specification of distinct root and shoot stem cell populations in the plant embryo. Finally, a dynamic transcriptional mechanism for lateral organ positioning that integrates spatial and temporal information into a repeating pattern is summarized.

Indexed as

Plant DevelopmentTranscription, GeneticAnimalsCell LineageGene Expression Regulation, PlantPlantsStem CellsTranscription FactorsTranscription Factors

Identifiers

PMID22305165
PMCPMC3870140
OpenAlexW15333186

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.