Evidence map›Paper›PMID 22304650›Full record

ArticleAnalytical chemistry2012

Novel mass spectrometric method for phosphorylation quantification using cerium oxide nanoparticles and tandem mass tags.

Weitao Jia, Armann Andaya, Julie A Leary

Abstract read
In one paragraph

Article in Analytical chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Phosphorylation stoichiometries of human eukaryotic initiation factors.International journal of molecular sciences · 2014
    Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Weitao JiaDepartment of Molecular and Cellular Biology, University of California, Davis, One Shields Avenue, Davis, California 95616, USA.
Armann Andaya
Julie A Leary

Funding

STRUCTURE AND FUNCTION OF HUMAN TRANSLATION COMPLEXESP01GM073732 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI DOUDNA, JENNIFER A · 2006 to 2010
$6.5M
NIGMS NIH HHS GM073732NIGMS NIH HHS P01 GM073732
6 · The paper itself

Abstract

The stoichiometry of protein phosphorylation significantly impacts protein function. The development of quantitative techniques in mass spectrometry has generated the ability to systematically monitor the regulation levels of various proteins. This study reports an integrated methodology using cerium oxide nanoparticles and isobaric tandem mass tag (TMT) labeling to assess absolute stoichiometries of protein phosphorylation. This protocol was designed to directly measure the dephosphorylation levels for a known phosphorylation site, therefore allowing for quantification of phosphosites. Both the accuracy and precision of the method were verified using standard peptides and protein tryptic digests. This novel method was then applied to quantify phosphorylations on eukaryotic initiation factor 3H (eIF3H), a protein integral to overall eukaryotic protein translation initiation. To date, this is the first report of assessment of protein phosphorylation quantification on eIF3.

Indexed as

Spectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationCeriumChromatography, High Pressure LiquidChromatography, Reverse-PhaseEukaryotic Initiation Factor-3Metal NanoparticlesPhosphopeptidesPhosphorylationceric oxideCeriumEukaryotic Initiation Factor-3Phosphopeptides

Identifiers

PMID22304650
PMCPMC3311540

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.