Evidence map›Paper›PMID 22303007›Full record

ArticleThe Journal of biological chemistry2012

Direct role for proliferating cell nuclear antigen in substrate recognition by the E3 ubiquitin ligase CRL4Cdt2.

Courtney G Havens, Nadia Shobnam, Estrella Guarino, Richard C Centore, Lee Zou, Stephen E Kearsey, Johannes C Walter

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. The cohesin modifier ESCO2 is stable during DNA replication.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2023
    Article
  4. Canonical binding ofFrontiers in molecular biosciences · 2023
    Article
  5. CRL4Genes · 2022
    Review
  6. Regulation of DNA Replication Licensing and Re-Replication by Cdt1.International journal of molecular sciences · 2021
    Review
  7. Article
  8. The PCNA interaction motifs revisited: thinking outside the PIP-box.Cellular and molecular life sciences : CMLS · 2019
    Article
  9. Article
  10. The emerging role for Cullin 4 family of E3 ligases in tumorigenesis.Biochimica et biophysica acta. Reviews on cancer · 2019
    Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Thymine DNA glycosylase is a CRL4Cdt2 substrate.The Journal of biological chemistry · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Courtney G HavensDepartment of Biological Chemistry & Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115, USA.
Nadia Shobnam
Estrella Guarino
Richard C Centore
Lee Zou
Stephen E Kearsey
Johannes C Walter
Harvard University · USMassachusetts General Hospital · USUniversity of Oxford · GB

Funding

The mechanism of vertebrate DNA replication terminationR01GM080676 · NIGMS · HARVARD MEDICAL SCHOOL · PI WALTER, JOHANNES · 2007 to 2019
$3.7M
Regulating the ATR checkpoint through protein ubiquitylationF32GM089150 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI CENTORE, RICHARD C. · 2009 to 2012
$152k
Mechanism of PCNA-Dependent Cdt1 Destruction in S phaseF32GM082014 · NIGMS · HARVARD MEDICAL SCHOOL · PI HAVENS, COURTNEY G · 2007 to 2009
$148k
Cancer Research UK C814/A9035NIGMS NIH HHS F32 GM082014NIGMS NIH HHS F32 GM089150NIGMS NIH HHS GM082014NIGMS NIH HHS GM089150NIGMS NIH HHS GM80676NIGMS NIH HHS R01 GM080676
6 · The paper itself

Abstract

The E3 ubiquitin ligase Cullin-ring ligase 4-Cdt2 (CRL4(Cdt2)) is emerging as an important cell cycle regulator that targets numerous proteins for destruction in S phase and after DNA damage, including Cdt1, p21, and Set8. CRL4(Cdt2) substrates contain a "PIP degron," which consists of a canonical proliferating cell nuclear antigen (PCNA) interaction motif (PIP box) and an adjacent basic amino acid. Substrates use their PIP box to form a binary complex with PCNA on chromatin and the basic residue to recruit CRL4(Cdt2) for substrate ubiquitylation. Using Xenopus egg extracts, we identify an acidic residue in PCNA that is essential to support destruction of all CRL4(Cdt2) substrates. This PCNA residue, which adjoins the basic amino acid of the bound PIP degron, is dispensable for substrate binding to PCNA but essential for CRL4(Cdt2) recruitment to chromatin. Our data show that the interaction of CRL4(Cdt2) with substrates requires molecular determinants not only in the substrate degron but also on PCNA. The results illustrate a potentially general mechanism by which E3 ligases can couple ubiquitylation to the formation of protein-protein interactions.

Indexed as

Amino Acid MotifsAmino Acid SequenceAnimalsCyclin-Dependent Kinase Inhibitor p27HumansMiceModels, MolecularMolecular Sequence DataProliferating Cell Nuclear AntigenProtein BindingSchizosaccharomycesSubstrate SpecificityUbiquitin-Protein Ligase ComplexesUbiquitin-Protein LigasesXenopus laevisXenopus ProteinsCyclin-Dependent Kinase Inhibitor p27dtl protein, XenopusProliferating Cell Nuclear AntigenUbiquitin-Protein Ligase ComplexesUbiquitin-Protein LigasesXenopus ProteinsXicl protein, Xenopus

Identifiers

PMID22303007
PMCPMC3322809
OpenAlexW2011960641

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.