Evidence map›Paper›PMID 22302144›Full record

ReviewJournal of dental research2012

Control of cytokine mRNA expression by RNA-binding proteins and microRNAs.

V Palanisamy, A Jakymiw, E A Van Tubergen, N J D'Silva, K L Kirkwood

Open access · greenAbstract readReview
In one paragraph

Review in Journal of dental research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 115 citations in OpenAlex.

  1. Article
  2. Review
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  14. Tristetraprolin regulates the skeletal phenotype and osteoclastogenic potential through monocytic myeloid-derived suppressor cells.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2024
    Article
  15. Review
  16. Review
  17. IL-6 trans-signaling in a humanized mouse model of scleroderma.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  18. Article
  19. Article
  20. The regulation of lncRNAs and miRNAs in SARS-CoV-2 infection.Frontiers in cell and developmental biology · 2023
    Review

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

V PalanisamyDepartment of Craniofacial Biology, Medical University of South Carolina, Charleston, SC, USA.
A Jakymiw
E A Van Tubergen
N J D'Silva
K L Kirkwood
Medical University of South Carolina · USUniversity of Michigan–Ann Arbor · US

Funding

THE ROLE OF THE RNA BINDING PROTEIN LA IN ORAL TUMOR BIOLOGYP20RR017696 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI KERN, CHRISTINE BRUINS · 2002 to 2011
$20.7M
Post-Transcriptional Regulation of Periodontal DiseR01DE021423 · NIDCR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI KIRKWOOD, KEITH L · 2011 to 2015
$2.1M
Negative Regulation of Innate Immune Responses through MAPK PhosphatasesR01DE018290 · NIDCR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KIRKWOOD, KEITH L · 2007 to 2011
$1.8M
Role of Rap1 in cadherin and integrin mediated cross-talk in oral keratinocytesR01DE018512 · NIDCR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI D'SILVA, NISHA J · 2007 to 2011
$1.7M
Regulation of mRNA Stability in Human SalivaR00DE018165 · NIDCR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI PALANISAMY, VISWANATHAN · 2009 to 2011
$732k
RNA Silencing in the Oral CavityR00DE018191 · NIDCR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI JAKYMIW, ANDREW GEORGE · 2010 to 2012
$725k
Characterization of the Immunomic Profile of Head and Neck CancerR21DE017977 · NIDCR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI D'SILVA, NISHA J · 2008 to 2009
$418k
The role of tristetraprolin in head and neck cancer progressionF32DE021305 · NIDCR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI VAN TUBERGEN, ELIZABETH ANNE · 2010 to 2012
$142k
NCRR NIH HHS 2P20 RR017696NCRR NIH HHS P20 RR017696NIDCR NIH HHS 1R01DE018290NIDCR NIH HHS 1R01DE021423NIDCR NIH HHS 5F32DE021305NIDCR NIH HHS F32 DE021305NIDCR NIH HHS K02DE0219513NIDCR NIH HHS R00 DE018165NIDCR NIH HHS R00DE018165NIDCR NIH HHS R00 DE018191NIDCR NIH HHS R00DE018191NIDCR NIH HHS R01 DE018290NIDCR NIH HHS R01 DE018512NIDCR NIH HHS R01DE018512NIDCR NIH HHS R01 DE021423NIDCR NIH HHS R21 DE017977NIDCR NIH HHS R21DE017977
6 · The paper itself

Abstract

Cytokines are critical mediators of inflammation and host defenses. Regulation of cytokines can occur at various stages of gene expression, including transcription, mRNA export, and post- transcriptional and translational levels. Among these modes of regulation, post-transcriptional regulation has been shown to play a vital role in controlling the expression of cytokines by modulating mRNA stability. The stability of cytokine mRNAs, including TNFα, IL-6, and IL-8, has been reported to be altered by the presence of AU-rich elements (AREs) located in the 3'-untranslated regions (3'UTRs) of the mRNAs. Numerous RNA-binding proteins and microRNAs bind to these 3'UTRs to regulate the stability and/or translation of the mRNAs. Thus, this paper describes the cooperative function between RNA-binding proteins and miRNAs and how they regulate AU-rich elements containing cytokine mRNA stability/degradation and translation. These mRNA control mechanisms can potentially influence inflammation as it relates to oral biology, including periodontal diseases and oral pharyngeal cancer progression.

Indexed as

Gene Expression Regulation3' Untranslated RegionsBase SequenceCyclooxygenase 2CytokinesInflammationInterleukin-6Interleukin-8MicroRNAsMolecular Sequence DataRegulatory Sequences, Ribonucleic AcidRNA-Binding ProteinsRNA, MessengerRNA Processing, Post-TranscriptionalRNA StabilityTumor Necrosis Factor-alpha3' Untranslated RegionsCyclooxygenase 2CytokinesInterleukin-6Interleukin-8MicroRNAsRegulatory Sequences, Ribonucleic AcidRNA-Binding ProteinsRNA, MessengerTumor Necrosis Factor-alphaVascular Endothelial Growth Factor A

Identifiers

PMID22302144
PMCPMC3383846
OpenAlexW2137138056

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.