Evidence map›Paper›PMID 22301906›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2012

Development of selective markers linked to a major QTL for parthenocarpy in eggplant (Solanum melongena L.).

Koji Miyatake, Takeo Saito, Satomi Negoro, Hirotaka Yamaguchi, Tsukasa Nunome, Akio Ohyama, Hiroyuki Fukuoka

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

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28citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

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  4. The mutation of CaCKI1 causes seedless fruits in chili pepper (Capsicum annuum).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
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  12. Loss of function of theProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. QTL mapping of parthenocarpic fruit set in North American processing cucumber.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016
    Article
  18. Article
  19. Article
  20. Detailed mapping of a resistance locus against Fusarium wilt in cultivated eggplant (Solanum melongena).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016
    Article
4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Koji MiyatakeNARO Institute of Vegetable and Tea Science, 360 Kusawa, Ano, Tsu, Mie 514-2392, Japan. miya0424@affrc.go.jp
Takeo Saito
Satomi Negoro
Hirotaka Yamaguchi
Tsukasa Nunome
Akio Ohyama
Hiroyuki Fukuoka

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Parthenocarpy, the ability to set fruits without pollination, is a useful trait for setting fruit under unfavorable conditions. To identify the loci controlling parthenocarpy in eggplant (Solanum melongena L.), we constructed linkage maps by using co-dominant simple sequence repeat and single nucleotide polymorphism markers in F(2) populations derived from intraspecific crosses between two non-parthenocarpic lines (LS1934 and Nakate-Shinkuro) and a parthenocarpic line (AE-P03). Total map distances were 1,414.6 cM (ALF2: LS1934 x AE-P03) and 1,153.8 cM (NAF2: Nakate-Shinkuro x AE-P03), respectively. Quantitative trait locus (QTL) analyses revealed two QTLs on chromosomes 3 and 8, which we denoted as Controlling parthenocarpy3.1 (Cop3.1) and Cop8.1, respectively. The percentage of phenotypic variance explained (PVE) of Cop3.1 was 6.3% in ALF2 (LOD = 4.2) and 10.6% in NAF2 (LOD = 3.0). The PVE of Cop8.1 was 45.7% in ALF2 (LOD = 23.8) and 29.7% in NAF2 (LOD = 7.9). Using a population of backcross inbred lines, we confirmed the effect of Cop8.1, but there was no evidence to support the contribution of Cop3.1. We need to verify the effect of Cop3.1 under various temperature conditions. In addition, we clarified the effectiveness of selective SSR markers, emf21H22 and emh11J10, mapped on each side of Cop8.1 in other F(2) populations derived from various parental combinations. This is the first report concerning QTL analysis of parthenocarpy in eggplant using molecular markers. It will be useful in marker-assisted selection and in revealing the genomic mechanism underlying parthenocarpy in eggplant.

Indexed as

Quantitative Trait LociChromosome MappingChromosomes, PlantCrosses, GeneticGenetic MarkersGenetic VariationModels, GeneticPhenotypePolymorphism, Single NucleotideSolanum melongenaTemperatureGenetic Markers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.