Evidence map›Paper›PMID 22301319›Full record

ArticleScience (New York, N.Y.)2012

Sequential signaling crosstalk regulates endomesoderm segregation in sea urchin embryos.

Aditya J Sethi, Radhika M Wikramanayake, Robert C Angerer, Ryan C Range, Lynne M Angerer

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it, 72 citations in OpenAlex.

  1. A Meta-Analysis of Alzheimer's Disease Brain Transcriptomic Data.Journal of Alzheimer's disease : JAD · 2019
    Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
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  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Gastrulation in the sea urchin.Current topics in developmental biology · 2020
    Review
  19. Article
  20. How Does the Regulatory Genome Work?Journal of computational biology : a journal of computational molecular cell biology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Aditya J SethiNational Institute of Dental and Craniofacial Research, National Institutes of Health, Bethesda, MD, USA.
Radhika M Wikramanayake
Robert C Angerer
Ryan C Range
Lynne M Angerer
National Institute of Dental and Craniofacial Research · USNational Institutes of Health · USUniversity of Oxford · GB

Funding

Molecular mechanisms of cell fate specificationZIADE000712 · NIDCR · NATIONAL INSTITUTE OF DENTAL & CRANIOFACIAL RESEARCH · PI ANGERER, ROBERT · 2009 to 2017
$6.8M
Intramural NIH HHS ZIA DE000712
6 · The paper itself

Abstract

The segregation of embryonic endomesoderm into separate endoderm and mesoderm fates is not well understood in deuterostomes. Using sea urchin embryos, we showed that Notch signaling initiates segregation of the endomesoderm precursor field by inhibiting expression of a key endoderm transcription factor in presumptive mesoderm. The regulatory circuit activated by this transcription factor subsequently maintains transcription of a canonical Wnt (cWnt) ligand only in endoderm precursors. This cWnt ligand reinforces the endoderm state, amplifying the distinction between emerging endoderm and mesoderm. Before gastrulation, Notch-dependent nuclear export of an essential β-catenin transcriptional coactivator from mesoderm renders it refractory to cWnt signals, insulating it against an endoderm fate. Thus, we report that endomesoderm segregation is a progressive process, requiring a succession of regulatory interactions between cWnt and Notch signaling.

Indexed as

Embryonic DevelopmentSignal TransductionAnimalsbeta CateninBlastomeresBlastulaEmbryo, NonmammalianEndodermGastrulationGene Expression Regulation, DevelopmentalGene Regulatory NetworksLigandsMesodermReceptors, NotchSea UrchinsTCF Transcription Factorsbeta CateninLigandsReceptors, NotchTCF Transcription FactorsTranscription FactorsWnt Proteins

Identifiers

PMID22301319
PMCPMC4827163
OpenAlexW2065273292

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.