Evidence map›Paper›PMID 22299652›Full record

ArticleBiochemistry2012

Proline 107 is a major determinant in maintaining the structure of the distal pocket and reactivity of the high-spin heme of MauG.

Manliang Feng, Lyndal M R Jensen, Erik T Yukl, Xiaoxi Wei, Aimin Liu, Carrie M Wilmot, Victor L Davidson

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Roles of multiple-proton transfer pathways and proton-coupled electron transfer in the reactivity of the bis-FeIV state of MauG.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  9. Article
  10. Article
  11. Bis-Fe(IV): nature's sniper for long-range oxidation.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2014
    Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Tryptophan-mediated charge-resonance stabilization in the bis-Fe(IV) redox state of MauG.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  18. MauG: a di-heme enzyme required for methylamine dehydrogenase maturation.Dalton transactions (Cambridge, England : 2003) · 2013
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Manliang FengDepartment of Chemistry, Tougaloo College, Tougaloo, Mississippi 39174, United States.
Lyndal M R Jensen
Erik T Yukl
Xiaoxi Wei
Aimin Liu
Carrie M Wilmot
Victor L Davidson
University of Minnesota · USGeorgia State University · USTougaloo College · USUniversity of Central Florida · US

Funding

Catalysis and biogenesis in methylamine dehydrogenaseR01GM066569 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI WILMOT, CAROLINE MARY · 2002 to 2015
$4.0M
Structure Function & Biosynthesis of Respiratory EnzymesR37GM041574 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI DAVIDSON, VICTOR L · 2009 to 2018
$3.4M
STRUCTURE/FUNCTION &BIOSYNTHESIS OF RESPIRATORY ENZYMESR01GM041574 · NIGMS · UNIVERSITY OF MISSISSIPPI MEDICAL CENTER · PI DAVIDSON, VICTOR L · 1988 to 2008
$2.7M
MauG-preMADH intermediate structures: Insight into long range electron transferF32GM097779 · NIGMS · UNIVERSITY OF MINNESOTA · PI YUKL, ERIK T · 2011 to 2013
$112k
NCI NIH HHS Y1-CO-1020NIGMS NIH HHS F32 GM097779NIGMS NIH HHS GM-41574NIGMS NIH HHS GM-66569NIGMS NIH HHS GM-97779NIGMS NIH HHS R01 GM041574NIGMS NIH HHS R01 GM066569NIGMS NIH HHS R37 GM041574NIGMS NIH HHS Y1-GM-1104
6 · The paper itself

Abstract

The diheme enzyme MauG catalyzes a six-electron oxidation required for posttranslational modification of a precursor of methylamine dehydrogenase (preMADH) to complete the biosynthesis of its protein-derived tryptophan tryptophylquinone (TTQ) cofactor. Crystallographic studies had shown that Pro107, which resides in the distal pocket of the high-spin heme of MauG, changes conformation upon binding of CO or NO to the heme iron. In this study, Pro107 was converted to Cys, Val, and Ser by site-directed mutagenesis. The structures of each of these MauG mutant proteins in complex with preMADH were determined, as were their physical and catalytic properties. P107C MauG was inactive, and the crystal structure revealed that Cys107 had been oxidatively modified to a sulfinic acid. Mass spectrometry revealed that this modification was present prior to crystallization. P107V MauG exhibited spectroscopic and catalytic properties that were similar to those of wild-type MauG, but P107V MauG was more susceptible to oxidative damage. The P107S mutation caused a structural change that resulted in the five-coordinate high-spin heme being converted to a six-coordinate heme with a distal axial ligand provided by Glu113. EPR and resonance Raman spectroscopy revealed this heme remained high-spin but with greatly increased rhombicity as compared to that of the axial signal of wild-type MauG. P107S MauG was resistant to reduction by dithionite and reaction with H(2)O(2) and unable to catalyze TTQ biosynthesis. These results show that the presence of Pro107 is critical in maintaining the proper structure of the distal heme pocket of the high-spin heme of MauG, allowing exogenous ligands to bind and directing the reactivity of the heme-activated oxygen during catalysis, thus minimizing the oxidation of other residues of MauG.

Indexed as

Bacterial ProteinsCatalysisCrystallography, X-RayHemeHemeproteinsIndolequinonesKineticsLigandsMass SpectrometryModels, MolecularMutagenesis, Site-DirectedOxidation-ReductionOxidoreductases Acting on CH-NH Group DonorsOxygenParacoccus denitrificansProlineBacterial ProteinsHemeHemeproteinsIndolequinonesLigandsmethylamine dehydrogenaseOxidoreductases Acting on CH-NH Group DonorsOxygenProlineTryptophantryptophan tryptophylquinone

Identifiers

PMID22299652
PMCPMC3365509
OpenAlexW2067472218

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.