Evidence map›Paper›PMID 22297847›Full record

ArticlePlant molecular biology2012

Serotonin accumulation in transgenic rice by over-expressing tryptophan decarboxylase results in a dark brown phenotype and stunted growth.

Parawee Kanjanaphachoat, Bi-Yin Wei, Shuen-Fang Lo, I-Wen Wang, Chang-Sheng Wang, Su-May Yu, Ming-Liang Yen, Sheng-Hsien Chiu, Chien-Chen Lai, Liang-Jwu Chen

Abstract read
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In one paragraph

Article in Plant molecular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Role of Serotonin in Cadmium Mitigation in Plants.Plants (Basel, Switzerland) · 2025
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  6. Structural variation in theMolecular breeding : new strategies in plant improvement · 2025
    Article
  7. Genetic dissection of a major locus SC9.1 conferring seed color in broomcorn millet (Panicum miliaceum).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. TheFrontiers in plant science · 2018
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Parawee KanjanaphachoatInstitute of Molecular Biology, National Chung Hsing University, Taichung 402, Taiwan.
Bi-Yin Wei
Shuen-Fang Lo
I-Wen Wang
Chang-Sheng Wang
Su-May Yu
Ming-Liang Yen
Sheng-Hsien Chiu
Chien-Chen Lai
Liang-Jwu Chen
National Chung Hsing University · TWNational Taiwan University · TWInstitute of Molecular Biology, Academia Sinica · TWNational Taipei University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A mutant M47286 with a stunted growth, low fertility and dark-brown phenotype was identified from a T-DNA-tagged rice mutant library. This mutant contained a copy of the T-DNA tag inserted at the location where the expression of two putative tryptophan decarboxylase genes, TDC-1 and TDC-3, were activated. Enzymatic assays of both recombinant proteins showed tryptophan decarboxylase activities that converted tryptophan to tryptamine, which could be converted to serotonin by a constitutively expressed tryptamine 5' hydroxylase (T5H) in rice plants. Over-expression of TDC-1 and TDC-3 in transgenic rice recapitulated the stunted growth, darkbrown phenotype and resulted in a low fertility similar to M47286. The degree of stunted growth and dark-brown color was proportional to the expression levels of TDC-1 and TDC-3. The levels of tryptamine and serotonin accumulation in these transgenic rice lines were also directly correlated with the expression levels of TDC-1 and TDC-3. A mass spectrometry assay demonstrated that the darkbrown leaves and hulls in the TDC-overexpressing transgenic rice were caused by the accumulation of serotonin dimer and that the stunted growth and low fertility were also caused by the accumulation of serotonin and serotonin dimer, but not tryptamine. These results represent the first evidence that over-expression of TDC results in stunted growth, low fertility and the accumulation of serotonin, which when converted to serotonin dimer, leads to a dark brown plant color.

Indexed as

ArabidopsisAromatic-L-Amino-Acid DecarboxylasesDimerizationDNA, BacterialGene ExpressionGenes, PlantMutationOryzaPhenotypePhotochemical ProcessesPigmentationPlant ProteinsPlants, Genetically ModifiedRecombinant ProteinsSerotoninTryptaminesAromatic-L-Amino-Acid DecarboxylasesDNA, BacterialPlant ProteinsRecombinant ProteinsSerotoninT-DNAtryptamineTryptamines

Identifiers

PMID22297847
OpenAlexW2059872140

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.