Evidence map›Paper›PMID 22296756›Full record

ArticleBiology direct2012

Lateral transfer of tetrahymanol-synthesizing genes has allowed multiple diverse eukaryote lineages to independently adapt to environments without oxygen.

Kiyotaka Takishita, Yoshito Chikaraishi, Michelle M Leger, Eunsoo Kim, Akinori Yabuki, Naohiko Ohkouchi, Andrew J Roger

Open access · goldAbstract read
In one paragraph

Article in Biology direct, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
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  7. Origin and Evolution of Polycyclic Triterpene Synthesis.Molecular biology and evolution · 2020
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  14. A distinct pathway for tetrahymanol synthesis in bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Kiyotaka TakishitaJapan Agency for Marine-Earth Science and Technology, Yokosuka, Kanagawa, 237-0061, Japan. takishitak@jamstec.go.jp
Yoshito Chikaraishi
Michelle M Leger
Eunsoo Kim
Akinori Yabuki
Naohiko Ohkouchi
Andrew J Roger
Japan Agency for Marine-Earth Science and Technology · JPDalhousie University · CA

Funding

Canadian Institutes of Health Research MOP-62809
6 · The paper itself

Abstract

Sterols are key components of eukaryotic cellular membranes that are synthesized by multi-enzyme pathways that require molecular oxygen. Because prokaryotes fundamentally lack sterols, it is unclear how the vast diversity of bacterivorous eukaryotes that inhabit hypoxic environments obtain, or synthesize, sterols. Here we show that tetrahymanol, a triterpenoid that does not require molecular oxygen for its biosynthesis, likely functions as a surrogate of sterol in eukaryotes inhabiting oxygen-poor environments. Genes encoding the tetrahymanol synthesizing enzyme squalene-tetrahymanol cyclase were found from several phylogenetically diverged eukaryotes that live in oxygen-poor environments and appear to have been laterally transferred among such eukaryotes.

Indexed as

Adaptation, BiologicalGene Transfer, HorizontalAmino Acid SequenceAnaerobiosisCell MembraneEukaryotaGas Chromatography-Mass SpectrometryLipidsLyasesOxygenPhagocytosisPhylogenySequence AlignmentSpecies SpecificityTriterpenesLipidsLyasesOxygensqualene cyclasetetrahymanolTriterpenes

Identifiers

PMID22296756
PMCPMC3317845
OpenAlexW2170758691

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.