Evidence map›Paper›PMID 22296641›Full record

ArticleMicrobial biotechnology2012

A bile-inducible membrane protein mediates bifidobacterial bile resistance.

Lorena Ruiz, Mary O'Connell-Motherway, Aldert Zomer, Clara G de los Reyes-Gavilán, Abelardo Margolles, Douwe van Sinderen

Abstract read
In one paragraph

Article in Microbial biotechnology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Frontiers in cellular and infection microbiology · 2026
    Article
  2. Article
  3. Article
  4. Stress Response in Bifidobacteria.Microbiology and molecular biology reviews : MMBR · 2022
    Review
  5. Article
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  12. Review
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  16. Article
  17. Accessing the inaccessible: molecular tools for bifidobacteria.Applied and environmental microbiology · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Lorena RuizDepartamento de Microbiología y Bioquímica de Productos Lácteos, Instituto de Productos Lácteos de Asturias, Villaviciosa, Asturias, Spain.
Mary O'Connell-Motherway
Aldert Zomer
Clara G de los Reyes-Gavilán
Abelardo Margolles
Douwe van Sinderen

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bbr_0838 from Bifidobacterium breve UCC2003 is predicted to encode a 683 residue membrane protein, containing both a permease domain that displays similarity to transporters belonging to the major facilitator superfamily, as well as a CBS (cystathionine beta synthase) domain. The high level of similarity to bile efflux pumps from other bifidobacteria suggests a significant and general role for Bbr_0838 in bile tolerance. Bbr_0838 transcription was shown to be monocistronic and strongly induced upon exposure to bile. Further analysis delineated the transcriptional start site and the minimal region required for promoter activity and bile regulation. Insertional inactivation of Bbr_0838 in B. breve UCC2003 resulted in a strain, UCC2003:838(800) , which exhibited reduced survival upon cholate exposure as compared with the parent strain, a phenotype that was reversed when a functional, plasmid-encoded Bbr_0838 gene was introduced into UCC2003:838(800) . Transcriptome analysis of UCC2003:838(800) grown in the presence or absence of bile demonstrated that transcription of Bbr_0832, which is predicted to encode a macrolide efflux transporter gene, was significantly increased in the presence of bile, representing a likely compensatory mechanism for bile removal in the absence of Bbr_0838. This study represents the first in-depth analysis of a bile-inducible locus in bifidobacteria, identifying a key gene relevant for bifidobacterial bile tolerance.

Indexed as

Drug Resistance, BacterialGene Expression Regulation, BacterialBifidobacteriumBileDetergentsGene Expression ProfilingGene Knockout TechniquesGenetic Complementation TestMembrane ProteinsMicrobial ViabilityMutagenesis, InsertionalPromoter Regions, GeneticTranscription Initiation SiteDetergentsMembrane Proteins

Identifiers

PMID22296641
PMCPMC3815329

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.