Evidence map›Paper›PMID 22293439›Full record

ArticleGenome biology2012

Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes.

John A St John, Edward L Braun, Sally R Isberg, Lee G Miles, Amanda Y Chong, Jaime Gongora, Pauline Dalzell, Christopher Moran, Bertrand Bed'hom, Arkhat Abzhanov and 38 more

Abstract readConference Proceedings
In one paragraph

Article in Genome biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed.

  1. Article
  2. Genome Evolution and the Future of Phylogenomics of Non-Avian Reptiles.Animals : an open access journal from MDPI · 2023
    Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Fourth Report on Chicken Genes and Chromosomes 2022.Cytogenetic and genome research · 2022
    Review
  8. Article
  9. Review
  10. A global phylogeny of turtles reveals a burst of climate-associated diversification on continental margins.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  11. Article
  12. Time lapse: A glimpse into prehistoric genomics.European journal of medical genetics · 2020
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

48 authors.

John A St John
Edward L Braun
Sally R Isberg
Lee G Miles
Amanda Y Chong
Jaime Gongora
Pauline Dalzell
Christopher Moran
Bertrand Bed'hom
Arkhat Abzhanov
Shane C Burgess
Amanda M Cooksey
Todd A Castoe
Nicholas G Crawford
Llewellyn D Densmore
Jennifer C Drew
Scott V Edwards
Brant C Faircloth
Matthew K Fujita
Matthew J Greenwold
Federico G Hoffmann
Jonathan M Howard
Taisen Iguchi
Daniel E Janes
Shahid Yar Khan
Satomi Kohno
Ap Jason de Koning
Stacey L Lance
Fiona M McCarthy
John E McCormack
Mark E Merchant
Daniel G Peterson
David D Pollock
Nader Pourmand
Brian J Raney
Kyria A Roessler
Jeremy R Sanford
Roger H Sawyer
Carl J Schmidt
Eric W Triplett
Tracey D Tuberville
Miryam Venegas-Anaya
Jason T Howard
Erich D Jarvis
Louis J Guillette
Travis C Glenn
Richard E Green
David A Ray

Funding

Genomic analysis of RNA binding protein target specificityR01GM085121 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI SANFORD, JEREMY ROBERT · 2008 to 2010
$1.1M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM085121
6 · The paper itself

Abstract

The International Crocodilian Genomes Working Group (ICGWG) will sequence and assemble the American alligator (Alligator mississippiensis), saltwater crocodile (Crocodylus porosus) and Indian gharial (Gavialis gangeticus) genomes. The status of these projects and our planned analyses are described.

Indexed as

GenomeSequence Analysis, DNAAlligators and CrocodilesAnimals

Identifiers

PMID22293439
PMCPMC3334581

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.