Evidence map›Paper›PMID 22292956›Full record

ArticleJournal of biomolecular structure & dynamics2012

Permeation pathway of homomeric connexin 26 and connexin 30 channels investigated by molecular dynamics.

Francesco Zonta, Guido Polles, Giuseppe Zanotti, Fabio Mammano

Open access · greenAbstract read
In one paragraph

Article in Journal of biomolecular structure & dynamics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Model-based evaluation of connexin hemichannel permeability.Computational and structural biotechnology journal · 2025
    Article
  3. Article
  4. Article
  5. Large-pore connexin hemichannels function like molecule transporters independent of ion conduction.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Calcium Regulation of Connexin Hemichannels.International journal of molecular sciences · 2024
    Review
  7. Molecular Dynamics Simulation of Permeation Through Connexin Channels.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  8. Review
  9. Article
  10. A Quantitative Assay for CaInternational journal of molecular sciences · 2022
    Article
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  12. Review
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Francesco ZontaDepartment of Physics and Astronomy G.Galilei, University of Padua, 35129 Padua, Italy.
Guido Polles
Giuseppe Zanotti
Fabio Mammano
University of Padua · ITVeneto Institute of Molecular Medicine · IT

Funding

Telethon GGP09137
6 · The paper itself

Abstract

Mutations in the genes GJB2 and GJB6 encoding human connnexin26 (hCx26) and connexin30 (hCx30), respectively, are the leading cause of non-syndromic prelingual deafness in several human populations. In this work, we exploited the high degree (77%) of sequence similarity shared by hCx26 and hCx30 to create atomistic models of homomeric hCx26 and hCx30 connexons starting from the X-ray crystallographic structure of an intercellular channel formed by hCx26 protomers at 3.5-å resolution. The equilibrium dynamics of the two protein complexes was followed for 40 ns each by Molecular Dynamics (MD) simulations. Our results indicate that, in hCx26, positively charged Lys41 residues establish a potential barrier within the fully open channel, hindering ion diffusion in the absence of an electrochemical gradient. A similar role is played, in hCx30, by negatively charged Glu49 residues. The different position and charge of these two ion sieves account for the differences in unitary conductance observed experimentally. Our results are discussed in terms of present models of voltage gating in connexin channels.

Indexed as

Amino Acid SequenceCalciumCell MembraneConnexin 26Connexin 30ConnexinsCrystallography, X-RayDeafnessHumansLysineModels, MolecularMolecular Dynamics SimulationMolecular Sequence DataPhospholipidsProtein ConformationCalciumConnexin 26Connexin 30ConnexinsGJB2 protein, humanGJB6 protein, humanLysinePhospholipids

Identifiers

PMID22292956
PMCPMC3500697
OpenAlexW1967059269

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.