Evidence map›Paper›PMID 22292921›Full record

ArticleTraffic (Copenhagen, Denmark)2012

The formation and stability of DC-SIGN microdomains require its extracellular moiety.

Ping Liu, Xiang Wang, Michelle S Itano, Aaron K Neumann, Ken Jacobson, Nancy L Thompson

Open access · greenAbstract read
In one paragraph

Article in Traffic (Copenhagen, Denmark), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Seminal Plasma Glycoproteins as Potential Ligands of Lectins Engaged in Immunity Regulation.International journal of environmental research and public health · 2022
    Review
  4. Dectin-1-Mediated DC-SIGN Recruitment toLife (Basel, Switzerland) · 2021
    Article
  5. Article
  6. Toward a new picture of the living plasma membrane.Protein science : a publication of the Protein Society · 2020
    Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ping LiuDepartment of Cell and Developmental Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Xiang Wang
Michelle S Itano
Aaron K Neumann
Ken Jacobson
Nancy L Thompson
University of North Carolina at Chapel Hill · US

Funding

STRUCTUREU54GM064346 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI IMPERIALI, BARBARA · 2001 to 2010
$74.9M
Structure and dynamics of membrane microdomains used for viral entry and egressR01GM041402 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI JACOBSON, KENNETH A · 1989 to 2016
$4.8M
NIGMS NIH HHS GM-041402NIGMS NIH HHS GM 64346NIGMS NIH HHS R01 GM041402NIGMS NIH HHS U54 GM064346
6 · The paper itself

Abstract

Dendritic cell-specific intercellular adhesion molecule (ICAM)-3-grabbing non-integrin (DC-SIGN) is a Ca(2+) -dependent transmembrane lectin that binds a large variety of pathogens and facilitates their uptake for subsequent antigen presentation. This receptor is present in cell surface microdomains, but factors involved in microdomain formation and their exceptional stability are not clear. To determine which domain/motif of DC-SIGN facilitates its presence in microdomains, we studied mutations at key locations including truncation of the cytoplasmic tail, and ectodomain mutations that resulted in the removal of the N-linked glycosylation site, the tandem repeats and the carbohydrate recognition domain (CRD), as well as modification of the calcium sites in the CRD required for carbohydrate binding. Confocal imaging and fluorescence recovery after photobleaching measurements showed that the cytoplasmic domain and the N-linked glycosylation site do not affect the ability of DC-SIGN to form stable microdomains. However, truncation of the CRD results in complete loss of visible microdomains and subsequent lateral diffusion of the mutants. Apart from cell adhesions, membrane domains are thought to be localized primarily via the cytoskeleton. By contrast, we propose that interactions between the CRD of DC-SIGN and the extracellular matrix and/or cis interactions with transmembrane scaffolding protein(s) play an essential role in organizing these microdomains.

Indexed as

Amino Acid MotifsAnimalsAntigens, CDCalciumCarbohydratesCell AdhesionCell Adhesion MoleculesCytoskeletonDC-Specific ICAM-3 Grabbing NonintegrinExtracellular MatrixGlycosylationHumansLectins, C-TypeMiceModels, BiologicalMutationAntigens, CDCalciumCarbohydratesCell Adhesion MoleculesDC-Specific ICAM-3 Grabbing NonintegrinICAM3 protein, humanICAM3 protein, mouseLectins, C-TypeReceptors, Cell Surface

Identifiers

PMID22292921
PMCPMC3365552
OpenAlexW1618901307

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.