Evidence map›Paper›PMID 22292814›Full record

ArticleACS chemical biology2012

Identification of high affinity polo-like kinase 1 (Plk1) polo-box domain binding peptides using oxime-based diversification.

Fa Liu, Jung-Eun Park, Wen-Jian Qian, Dan Lim, Andrej Scharow, Thorsten Berg, Michael B Yaffe, Kyung S Lee, Terrence R Burke

Abstract read
In one paragraph

Article in ACS chemical biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Fa LiuChemical Biology Laboratory, Molecular Discovery Program, Center for Cancer Research, National Cancer Institute-Frederick, Frederick, MD 21702, USA.
Jung-Eun Park
Wen-Jian Qian
Dan Lim
Andrej Scharow
Thorsten Berg
Michael B Yaffe
Kyung S Lee
Terrence R Burke

Funding

Inhibitors of Tyrosine Kinase-Dependent Signalling as Anti-Cancer AgentsZIABC006198 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI BURKE, TERRENCE · 2009 to 2025
$13.7M
Development of inhibitors targeting Plk1 polo-box domainZIABC010681 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LEE, KYUNG · 2009 to 2025
$5.9M
Protein Kinase Signaling and Cell Cycle ControlR01ES015339 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI YAFFE, MICHAEL B · 2007 to 2017
$4.3M
PHOSPHOSERINE DEPENDENT ASSEMBLY OF SIGNALING COMPLEXESR01GM060594 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI YAFFE, MICHAEL B · 2000 to 2007
$2.2M
Development of anti-polo-box therapeutic agentsZ01BC010681 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LEE, KYUNG · 2005 to 2008
$466k
Intramural NIH HHS Z01 BC010681Intramural NIH HHS Z99 CA999999Intramural NIH HHS ZIA BC006198NCI NIH HHS Y99 CA999999NIEHS NIH HHS ES015339NIEHS NIH HHS R01 ES015339NIGMS NIH HHS R01 GM060594NIGMS NIH HHS R01 GM60594
6 · The paper itself

Abstract

In an effort to develop improved binding antagonists of the polo-like kinase 1 (Plk1) polo-box domain (PBD), we optimized interactions of the known high affinity 5-mer peptide PLHSpT using oxime-based post solid-phase peptide diversification of the N-terminal Pro residue. This allowed us to achieve up to two orders of magnitude potency enhancement. An X-ray crystal structure of the highest affinity analogue in complex with Plk1 PBD revealed new binding interactions in a hydrophobic channel that had been occluded in X-ray structures of the unliganded protein. This study represents an important example where amino acid modification by post solid-phase oxime ligation can facilitate the development of protein-protein interaction inhibitors by identifying new binding pockets that would not otherwise be accessible to coded amino acid residues.

Indexed as

Solid-Phase Synthesis TechniquesCell Cycle ProteinsCell LineCrystallography, X-RayHumansModels, MolecularOximesPeptidesPolo-Like Kinase 1Protein BindingProtein Serine-Threonine KinasesProtein Structure, TertiaryProto-Oncogene ProteinsCell Cycle ProteinsOximesPeptidesPolo-Like Kinase 1Protein Serine-Threonine KinasesProto-Oncogene Proteins

Identifiers

PMID22292814
PMCPMC3355227

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.