Evidence map›Paper›PMID 22291963›Full record

ArticlePloS one2012

Histone chaperone Asf1 plays an essential role in maintaining genomic stability in fission yeast.

Katsuhiro Tanae, Tomitaka Horiuchi, Yuzy Matsuo, Satoshi Katayama, Makoto Kawamukai

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. The longevity and reversibility of quiescence inCell cycle (Georgetown, Tex.) · 2023
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  5. Review
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  10. Review
  11. Structural basis for inhibition of the histone chaperone activity of SET/TAF-Iβ by cytochrome c.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Katsuhiro TanaeDepartment of Life Science and Biotechnology, Faculty of Life and Environmental Science, Shimane University, Matsue, Japan.
Tomitaka Horiuchi
Yuzy Matsuo
Satoshi Katayama
Makoto Kawamukai
Shimane University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The histone H3-H4 chaperone Asf1 is involved in chromatin assembly (or disassembly), histone exchange, regulation of transcription, and chromatin silencing in several organisms. To investigate the essential functions of Asf1 in Schizosaccharomyces pombe, asf1-ts mutants were constructed by random mutagenesis using PCR. One mutant (asf1-33(ts)) was mated with mutants in 77 different kinase genes to identify synthetic lethal combinations. The asf1-33 mutant required the DNA damage checkpoint factors Chk1 and Rad3 for its survival at the restrictive temperature. Chk1, but not Cds1, was phosphorylated in the asf1-33 mutant at the restrictive temperature, indicating that the DNA damage checkpoint was activated in the asf1-33 mutant. DNA damage occured in the asf1-33 mutant, with degradation of the chromosomal DNA observed through pulse-field gel electrophoresis and the formation of Rad22 foci. Sensitivity to micrococcal nuclease in the asf1-33 mutant was increased compared to the asf1(+) strain at the restrictive temperature, suggesting that asf1 mutations also caused a defect in overall chromatin structure. The Asf1-33 mutant protein was mislocalized and incapable of binding histones. Furthermore, histone H3 levels at the centromeric outer repeat region were decreased in the asf1-33 mutant and heterochromatin structure was impaired. Finally, sim3, which encodes a CenH3 histone chaperone, was identified as a strong suppressor of the asf1-33 mutant. Taken together, these results clearly indicate that Asf1 plays an essential role in maintaining genomic stability in S. pombe.

Indexed as

Adaptation, PhysiologicalCell Cycle CheckpointsCell Cycle ProteinsCell ShapeCell SurvivalCheckpoint Kinase 1Checkpoint Kinase 2Genomic InstabilityHistone ChaperonesHistonesModels, BiologicalMolecular ChaperonesOrganisms, Genetically ModifiedProtein BindingProtein KinasesSchizosaccharomycesCell Cycle ProteinsCheckpoint Kinase 1Checkpoint Kinase 2Chk1 protein, S pombeCia1 protein, S pombeHistone ChaperonesHistonesMolecular ChaperonesProtein Kinasesrad3 protein, S pombeSchizosaccharomyces pombe Proteins

Identifiers

PMID22291963
PMCPMC3266922
OpenAlexW2053542741

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.