Evidence map›Paper›PMID 22291606›Full record

ArticlePLoS genetics2012

USF-1 is critical for maintaining genome integrity in response to UV-induced DNA photolesions.

Yorann Baron, Sébastien Corre, Nicolas Mouchet, Sophie Vaulont, Sharon Prince, Marie-Dominique Galibert

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 21 citations in OpenAlex.

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  11. Significant association between upstream transcription factor 1 rs2516839 polymorphism and hepatocellular carcinoma risk: a case-control study.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2015
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Yorann BaronCNRS-UMR6061 Genetic and Development Institute of Rennes, RTO Team, Rennes, France.
Sébastien Corre
Nicolas Mouchet
Sophie Vaulont
Sharon Prince
Marie-Dominique Galibert
Institut de génétique et de développement de Rennes · FRInstitut Cochin · FRUniversité de Rennes · FRUniversity of Cape Town · ZA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An important function of all organisms is to ensure that their genetic material remains intact and unaltered through generations. This is an extremely challenging task since the cell's DNA is constantly under assault by endogenous and environmental agents. To protect against this, cells have evolved effective mechanisms to recognize DNA damage, signal its presence, and mediate its repair. While these responses are expected to be highly regulated because they are critical to avoid human diseases, very little is known about the regulation of the expression of genes involved in mediating their effects. The Nucleotide Excision Repair (NER) is the major DNA-repair process involved in the recognition and removal of UV-mediated DNA damage. Here we use a combination of in vitro and in vivo assays with an intermittent UV-irradiation protocol to investigate the regulation of key players in the DNA-damage recognition step of NER sub-pathways (TCR and GGR). We show an up-regulation in gene expression of CSA and HR23A, which are involved in TCR and GGR, respectively. Importantly, we show that this occurs through a p53 independent mechanism and that it is coordinated by the stress-responsive transcription factor USF-1. Furthermore, using a mouse model we show that the loss of USF-1 compromises DNA repair, which suggests that USF-1 plays an important role in maintaining genomic stability.

Indexed as

AnimalsBiopsyCarrier ProteinsCell SurvivalDNADNA-Binding ProteinsDNA DamageDNA RepairDNA Repair EnzymesGene Expression RegulationGenomic InstabilityHSP70 Heat-Shock ProteinsHumansKeratinocytesMiceMice, KnockoutCarrier ProteinsDNADNA-Binding ProteinsDNA Repair EnzymesHSP70 Heat-Shock ProteinsHSPA9 protein, humanHspa9 protein, mouseHspa9-ps1 protein, mouseMitochondrial ProteinsRad23a protein, mouseRAD23B protein, humanRad23b protein, mouseRNA, Small InterferingUpstream Stimulatory FactorsUSF1 protein, humanUsf1 protein, mouse

Identifiers

PMID22291606
PMCPMC3266871
OpenAlexW1993392404

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.