Evidence map›Paper›PMID 22291198›Full record

ArticlePlant physiology2012

The ubiquitin E3 ligase LOSS OF GDU2 is required for GLUTAMINE DUMPER1-induced amino acid secretion in Arabidopsis.

Réjane Pratelli, Damian D Guerra, Shi Yu, Mark Wogulis, Edward Kraft, Wolf B Frommer, Judy Callis, Guillaume Pilot

Erratum issuedAbstract read
In one paragraph

Article in Plant physiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Functional Characterization of PotatoInternational journal of molecular sciences · 2023
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  6. Review
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  8. Article
  9. Review
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  11. Article
  12. The UBC27-AIRP3 ubiquitination complex modulates ABA signaling by promoting the degradation of ABI1 in Arabidopsis.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Targeted Profiling ofThe Plant cell · 2018
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

8 authors.

Réjane PratelliDepartment of Plant Pathology, Physiology, and Weed Science, Virginia Tech, Blacksburg, Virginia 24061, USA.
Damian D Guerra
Shi Yu
Mark Wogulis
Edward Kraft
Wolf B Frommer
Judy Callis
Guillaume Pilot

Funding

UC Davis MCB T32 Administrative Supplement to Recognize Excellence in Diversity, Equity, Inclusion, and Accessibility (DEIA) MentorshipT32GM007377 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI CHEDIN, FREDERIC LOUIS · 1985 to 2023
$9.9M
Mechannisms of specificity and control of ubiquitylationF32GM078896 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI WOGULIS, MARK D · 2007 to 2007
$40k
NIGMS NIH HHS F32GM078896-01A1NIGMS NIH HHS GM0007377NIGMS NIH HHS T32 GM007377
6 · The paper itself

Abstract

Amino acids serve as transport forms for organic nitrogen in the plant, and multiple transport steps are involved in cellular import and export. While the nature of the export mechanism is unknown, overexpression of GLUTAMINE DUMPER1 (GDU1) in Arabidopsis (Arabidopsis thaliana) led to increased amino acid export. To gain insight into GDU1's role, we searched for ethyl-methanesulfonate suppressor mutants and performed yeast-two-hybrid screens. Both methods uncovered the same gene, LOSS OF GDU2 (LOG2), which encodes a RING-type E3 ubiquitin ligase. The interaction between LOG2 and GDU1 was confirmed by glutathione S-transferase pull-down, in vitro ubiquitination, and in planta coimmunoprecipitation experiments. Confocal microscopy and subcellular fractionation indicated that LOG2 and GDU1 both localized to membranes and were enriched at the plasma membrane. LOG2 expression overlapped with GDU1 in the xylem and phloem tissues of Arabidopsis. The GDU1 protein encoded by the previously characterized intragenic suppressor mutant log1-1, with an arginine in place of a conserved glycine, failed to interact in the multiple assays, suggesting that the Gdu1D phenotype requires the interaction of GDU1 with LOG2. This hypothesis was supported by suppression of the Gdu1D phenotype after reduction of LOG2 expression using either artificial microRNAs or a LOG2 T-DNA insertion. Altogether, in accordance with the emerging bulk of data showing membrane protein regulation via ubiquitination, these data suggest that the interaction of GDU1 and the ubiquitin ligase LOG2 plays a significant role in the regulation of amino acid export from plant cells.

Indexed as

Amino AcidsAmino Acid SubstitutionArabidopsisArabidopsis ProteinsCell MembraneDNA, BacterialGenes, SuppressorGlucuronidaseMembrane ProteinsMicroRNAsMicrosomesMutationMyristic AcidPhenotypePlant Vascular BundleProtein BindingAmino AcidsArabidopsis ProteinsDNA, BacterialGDU1 protein, ArabidopsisGlucuronidaseLog2 protein, ArabidopsisMembrane ProteinsMicroRNAsMyristic AcidT-DNAUbiquitin-Protein Ligases

Identifiers

PMID22291198
PMCPMC3320174

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.