Evidence map›Paper›PMID 22291023›Full record

ArticleThe Journal of biological chemistry2012

Short chain dehydrogenase/reductase rdhe2 is a novel retinol dehydrogenase essential for frog embryonic development.

Olga V Belyaeva, Seung-Ah Lee, Mark K Adams, Chenbei Chang, Natalia Y Kedishvili

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
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  4. Dietary Vitamin A Impacts Refractory Telogen.Frontiers in cell and developmental biology · 2021
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  18. Investigation of retinoic acid function during embryonic brain development using retinaldehyde-rescued Rdh10 knockout mice.Developmental dynamics : an official publication of the American Association of Anatomists · 2013
    Article
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Olga V BelyaevaDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Alabama at Birmingham, Birmingham, Alabama 35294, USA. belyaeva@uab.edu
Seung-Ah Lee
Mark K Adams
Chenbei Chang
Natalia Y Kedishvili
University of Alabama at Birmingham · US

Funding

SHORT-CHAIN DEHYDROGENASES IN RETINOL/STEROL METABOLISMR01AA012153 · NIAAA · UNIVERSITY OF MISSOURI KANSAS CITY · PI KEDISHVILI, NATALIA Y · 2000 to 2017
$5.1M
ErbB signaling in vertebrate morphogenesisR01GM083029 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI CHANG, CHENBEI · 2009 to 2010
$616k
NIAAA NIH HHS AA12153NIAAA NIH HHS R01 AA012153NIGMS NIH HHS GM83029NIGMS NIH HHS R01 GM083029
6 · The paper itself

Abstract

The enzymes responsible for the rate-limiting step in retinoic acid biosynthesis, the oxidation of retinol to retinaldehyde, during embryogenesis and in adulthood have not been fully defined. Here, we report that a novel member of the short chain dehydrogenase/reductase superfamily, frog sdr16c5, acts as a highly active retinol dehydrogenase (rdhe2) that promotes retinoic acid biosynthesis when expressed in mammalian cells. In vivo assays of rdhe2 function show that overexpression of rdhe2 in frog embryos leads to posteriorization and induction of defects resembling those caused by retinoic acid toxicity. Conversely, antisense morpholino-mediated knockdown of endogenous rdhe2 results in phenotypes consistent with retinoic acid deficiency, such as defects in anterior neural tube closure, microcephaly with small eye formation, disruption of somitogenesis, and curved body axis with bent tail. Higher doses of morpholino induce embryonic lethality. Analyses of retinoic acid levels using either endogenous retinoic acid-sensitive gene hoxd4 or retinoic acid reporter cell line both show that the levels of retinoic acid are significantly decreased in rdhe2 morphants. Taken together, these results provide strong evidence that Xenopus rdhe2 functions as a retinol dehydrogenase essential for frog embryonic development in vivo. Importantly, the retinol oxidizing activity of frog rdhe2 is conserved in its mouse homologs, suggesting that rdhe2-related enzymes may represent the previously unrecognized physiologically relevant retinol dehydrogenases that contribute to retinoic acid biosynthesis in higher vertebrates.

Indexed as

Alcohol OxidoreductasesAmino Acid MotifsAmino Acid SequenceAnimalsBase SequenceCell LineGene Expression Regulation, DevelopmentalGene Expression Regulation, EnzymologicHumansMiceMolecular Sequence DataOrgan SpecificitySequence AlignmentTretinoinXenopus laevisXenopus ProteinsAlcohol Oxidoreductasesretinol dehydrogenaseTretinoinXenopus Proteins

Identifiers

PMID22291023
PMCPMC3308774
OpenAlexW1963660847

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.