Evidence map›Paper›PMID 22290408›Full record

ArticlePlant molecular biology2012

Kiwifruit floral gene APETALA2 is alternatively spliced and accumulates in aberrant indeterminate flowers in the absence of miR172.

Erika Varkonyi-Gasic, Robyn H Lough, Sarah M A Moss, Rongmei Wu, Roger P Hellens

Abstract read
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In one paragraph

Article in Plant molecular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
  2. miR172-Mediated Repression ofInternational journal of molecular sciences · 2026
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  8. Prolonged On-Vine vs. Cold ofFoods (Basel, Switzerland) · 2022
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  9. Downregulation of lncRNAInternational journal of molecular sciences · 2021
    Article
  10. Article
  11. Article
  12. MicroRNAs in Woody Plants.Frontiers in plant science · 2021
    Review
  13. Article
  14. Article
  15. Rht23 (5Dq') likely encodes a Q homeologue with pleiotropic effects on plant height and spike compactness.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018
    Article
  16. Article
  17. Article
  18. Short tandem target mimic rice lines uncover functions of miRNAs in regulating important agronomic traits.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  19. Article
  20. The Class II Trehalose 6-phosphate Synthase GeneFrontiers in plant science · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Erika Varkonyi-GasicThe New Zealand Institute for Plant & Food Research Mt Albert, Auckland Mail Centre, Private Bag 92169, Auckland 1142, New Zealand. erika.varkonyi-gasic@plantandfood.co.nz
Robyn H Lough
Sarah M A Moss
Rongmei Wu
Roger P Hellens
Plant & Food Research · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Arabidopsis, the identity of perianth and reproductive organs are specified by antagonistic action of two floral homeotic genes, APETALA2 (AP2) and AGAMOUS (AG). AP2 is also negatively regulated by an evolutionary conserved interaction with a microRNA, miR172, and has additional roles in general plant development. A kiwifruit gene with high levels of homology to AP2 and AP2-like genes from other plant species was identified. The transcript was abundant in the kiwifruit flower, particularly petal, suggesting a role in floral organ identity. Splice variants were identified, all containing both AP2 domains, including a variant that potentially produces a shorter transcript without the miRNA172 targeting site. Increased AP2 transcript accumulation was detected in the aberrant flowers of the mutant ‘Pukekohe dwarf’ with multiple perianth whorls and extended petaloid features. In contrast to normal kiwifruit flowers, the aberrant flowers failed to accumulate miR172 in the developing whorls, although accumulation was detected at the base of the flower. An additional role during dormancy in kiwifruit was proposed based on AP2 transcript accumulation in axillary buds before and after budbreak.

Indexed as

Gene Expression Regulation, PlantMicroRNAsActinidiaAlternative SplicingAmino Acid SequenceArabidopsis ProteinsFlowersHomeodomain ProteinsMolecular Sequence DataMutationNuclear ProteinsPhylogenySeasonsSequence Homology, Nucleic AcidAPETALA2 protein, ArabidopsisArabidopsis ProteinsHomeodomain ProteinsMicroRNAsNuclear Proteins

Identifiers

PMID22290408
OpenAlexW2034606213

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.