Evidence map›Paper›PMID 22290315›Full record

ArticleJournal of mathematical biology2013

Inverse problems in neuronal calcium signaling.

Jay Raol, Steven J Cox

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of mathematical biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 58% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jay RaolDepartment of Computational and Applied Mathematics, Rice University, Houston, TX, USA.
Steven J Cox
Rice University · US

Funding

Training in Biomedical Discovery from Large Scale Data SetsT90DA022885 · NIDA · BAYLOR COLLEGE OF MEDICINE · PI PALZKILL, TIMOTHY · 2006 to 2009
$635k
Training in Biomedical Discovery from Large Scale Data SetsR90DA023418 · NIDA · BAYLOR COLLEGE OF MEDICINE · PI PALZKILL, TIMOTHY · 2006 to 2009
$582k
NIDA NIH HHS R90DA023418NIDA NIH HHS T90DA022885
6 · The paper itself

Abstract

Calcium is the most important of the brain's second messengers. Thanks to engineered fluorescent indicators and caged compounds we have an excellent qualitative picture of its regulation and impact.With the advent of new scanning technology that permits one to observe the calcium signal throughout a highly branched neuron the potential exists for functional, single cell, quantitative calcium imaging. To help realize that potential we analyze a sequence of four inverse problems that infer the parameters of the cytosolic calcium buffers and plasma membrane calcium pumps and channels from the light shed by fluorescent indicators following specific stimulus protocols. Our analyses lead in each case to practical algorithms that we illustrate and test on synthetic data.

Indexed as

Models, NeurologicalAlgorithmsAnimalsCalcium SignalingFluorescent DyesKineticsMathematical ConceptsNeuronsSynthetic BiologyFluorescent Dyes

Identifiers

PMID22290315
OpenAlexW1973974485

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.