Evidence map›Paper›PMID 22289984›Full record

ArticleLeukemia2012

Chromatin modifications induced by the AML1-ETO fusion protein reversibly silence its genomic targets through AML1 and Sp1 binding motifs.

A Maiques-Diaz, F S Chou, M Wunderlich, G Gómez-López, F V Jacinto, S Rodriguez-Perales, M J Larrayoz, M J Calasanz, J C Mulloy, J C Cigudosa and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Leukemia, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Prognostic value of the PDLIM family in acute myeloid leukemia.American journal of translational research · 2019
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

A Maiques-DiazMolecular Cytogenetics Group, Human Cancer Genetics programme, Centro Nacional Investigaciones Oncologicas, Centro de Investigaciones de Enfermedades Raras, Madrid, Spain.
F S Chou
M Wunderlich
G Gómez-López
F V Jacinto
S Rodriguez-Perales
M J Larrayoz
M J Calasanz
J C Mulloy
J C Cigudosa
S Alvarez
Cincinnati Children's Hospital Medical Center · USSpanish National Cancer Research Centre · ESUniversidad de Navarra · ESCentre for Biomedical Network Research on Rare Diseases · ESInstitut d'Investigació Biomédica de Bellvitge · ES

Funding

Cincinnati Center for Excellence in Molecular HematologyP30DK090971 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI ZHENG, YI · 2010 to 2015
$4.0M
The Role of CBFb-MYH11 in Acute Myeloid LeukemiaR01CA118319 · NCI · CINCINNATI CHILDRENS HOSP MED CTR · PI MULLOY, JAMES C · 2006 to 2010
$1.5M
NCI NIH HHS CA118319NCI NIH HHS R01 CA118319NIDDK NIH HHS P30 DK090971
6 · The paper itself

Abstract

The AML1-ETO fusion protein, which is present in 10-15% of cases of acute myeloid leukemia, is known to repress myeloid differentiation genes through DNA binding and recruitment of chromatin-modifying proteins and transcription factors in target genes. ChIP-chip analysis of human hematopoietic stem/progenitor cells transduced with the AML1-ETO fusion gene enabled us to identify 1168 AML1-ETO target genes, 103 of which were co-occupied by histone deacetylase 1 (HDAC1) and had lost the hyperacetylation mark at histone H4, and 264 showed a K9 trimethylation at histone H3. Enrichment of genes involved in hematopoietic differentiation and in specific signaling pathways was observed in the presence of these epigenetic modifications associated with an 'inactive' chromatin status. Furthermore, AML1-ETO target genes had a significant correlation between the chromatin marks studied and transcriptional silencing. Interestingly, AML1 binding sites were absent on a large number of selected AML1-ETO promoters and an Sp1 binding site was found in over 50% of them. Reversible silencing induced by the fusion protein in the presence of AML1 and/or Sp1 transcription factor binding site was confirmed. Therefore, this study provides a global analysis of AML1-ETO functional chromatin modifications and identifies the important role of Sp1 in the DNA binding pattern of AML1-ETO, suggesting a role for Sp1-targeted therapy in this leukemia subtype.

Indexed as

AcetylationBinding SitesCells, CulturedChromatinChromatin ImmunoprecipitationCore Binding Factor Alpha 2 SubunitEpigenesis, GeneticGenomicsHematopoietic Stem CellsHistone Deacetylase 1HistonesHumansLeukemia, Myeloid, AcuteOncogene Proteins, FusionPromoter Regions, GeneticReal-Time Polymerase Chain ReactionAML1-ETO fusion protein, humanChromatinCore Binding Factor Alpha 2 SubunitHDAC1 protein, humanHistone Deacetylase 1HistonesOncogene Proteins, FusionRNA, MessengerRUNX1 Translocation Partner 1 ProteinSp1 Transcription Factor

Identifiers

PMID22289984
OpenAlexW2050404969

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.