Evidence map›Paper›PMID 22289416›Full record

ArticleGenomics2012

Whole-exome sequencing in a single proband reveals a mutation in the CHST8 gene in autosomal recessive peeling skin syndrome.

Rita M Cabral, Mazen Kurban, Muhammad Wajid, Yutaka Shimomura, Lynn Petukhova, Angela M Christiano

Open access · greenAbstract read
In one paragraph

Article in Genomics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
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  4. Next-generation sequencing in dermatology.Frontiers in medicine · 2023
    Review
  5. Article
  6. Article
  7. Article
  8. Article
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  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. A Case of Peeling Skin Syndrome.Indian dermatology online journal
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Rita M CabralDepartment of Dermatology, Columbia University, Russ Berrie Medical Science Pavilion, New York, NY 10032, USA.
Mazen Kurban
Muhammad Wajid
Yutaka Shimomura
Lynn Petukhova
Angela M Christiano
Columbia University · USColumbia University Irving Medical Center · US

Funding

MOLECULAR GENETICS OF THE KERATODERMASR01AR044924 · NIAMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CHRISTIANO, ANGELA M · 1998 to 2008
$2.4M
NIAMS NIH HHS R01 AR044924NIAMS NIH HHS R01AR44924
6 · The paper itself

Abstract

Generalized peeling skin syndrome (PSS) is an autosomal recessive genodermatosis characterized by lifelong, continuous shedding of the upper epidermis. Using whole-genome homozygozity mapping and whole-exome sequencing, we identified a novel homozygous missense mutation (c.229C>T, R77W) within the CHST8 gene, in a large consanguineous family with non-inflammatory PSS type A. CHST8 encodes a Golgi transmembrane N-acetylgalactosamine-4-O-sulfotransferase (GalNAc4-ST1), which we show by immunofluorescence staining to be expressed throughout normal epidermis. A colorimetric assay for total sulfated glycosaminoglycan (GAG) quantification, comparing human keratinocytes (CCD1106 KERTr) expressing wild type and mutant recombinant GalNAc4-ST1, revealed decreased levels of total sulfated GAGs in cells expressing mutant GalNAc4-ST1, suggesting loss of function. Western blotting revealed lower expression levels of mutant recombinant GalNAc4-ST1 compared to wild type, suggesting that accelerated degradation may result in loss of function, leading to PSS type A. This is the first report describing a mutation as the cause of PSS type A.

Indexed as

Genes, RecessiveMutation, MissenseAmino Acid SequenceBlotting, WesternChromosome MappingConsanguinityDermatitis, ExfoliativeEpidermisExomeFemaleFluorescent Antibody TechniqueGene Expression RegulationGenetic LinkageGlycosaminoglycansHomozygoteHumansA73025GlycosaminoglycansN-acetylgalactosamine-4-sulfotransferaseSulfotransferases

Identifiers

PMID22289416
PMCPMC4362535
OpenAlexW2050618960

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.