Evidence map›Paper›PMID 22288420›Full record

ArticleJournal of proteome research2012

Vesicle and vesicle-free extracellular proteome of Paracoccidioides brasiliensis: comparative analysis with other pathogenic fungi.

Milene C Vallejo, Ernesto S Nakayasu, Alisson L Matsuo, Tiago J P Sobreira, Larissa V G Longo, Luciane Ganiko, Igor C Almeida, Rosana Puccia

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of proteome research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed
10.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed, 181 citations in OpenAlex.

  1. Article
  2. Article
  3. Insights from Mass Spectrometry-Based Proteomics onJournal of fungi (Basel, Switzerland) · 2025
    Review
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  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Proteomics ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  12. Review
  13. Review
  14. Review
  15. Extracellular Vesicles of the Plant PathogenJournal of fungi (Basel, Switzerland) · 2023
    Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Review

48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Milene C VallejoDepartamento de Microbiologia, Imunologia e Parasitologia, Universidade Federal de São Paulo , UNIFESP, 04023-062 São Paulo, SP, Brazil.
Ernesto S Nakayasu
Alisson L Matsuo
Tiago J P Sobreira
Larissa V G Longo
Luciane Ganiko
Igor C Almeida
Rosana Puccia
Universidade Federal de São Paulo · BRThe University of Texas at El Paso · USBrazilian Biosciences National Laboratory · BR

Funding

TOXICOLOGY PROJECTG12RR008124 · NCRR · UNIVERSITY OF TEXAS EL PASO · PI WALSH, ELIZABETH J · 1992 to 2011
$20.8M
NCRR NIH HHS 5G12RR008124-16A1NCRR NIH HHS 5G12RR008124-16A1S1NCRR NIH HHS G12 RR008124
6 · The paper itself

Abstract

Microorganisms release effector molecules that modulate the host machinery enabling survival, replication, and dissemination of a pathogen. Here we characterized the extracellular proteome of Paracoccidioides brasiliensis at its pathogenic yeast phase. Cell-free culture supernatants from the Pb18 isolate, cultivated in defined medium, were separated into vesicle and vesicle-free fractions, digested with trypsin, and analyzed by liquid chromatography-tandem mass spectrometry. In vesicle and vesicle-free preparations we identified, respectively, 205 and 260 proteins with two or more peptides, including 120 overlapping identifications. Almost 70% of the sequences were predicted as secretory, mostly using nonconventional secretory pathways, and many have previously been localized to fungal cell walls. A total of 72 proteins were considered as commonly transported by extracellular vesicles, considering that orthologues have been reported in at least two other fungal species. These sequences were mostly related to translation, carbohydrate and protein metabolism, oxidation/reduction, transport, response to stress, and signaling. This unique proteomic analysis of extracellular vesicles and vesicle-free released proteins in a pathogenic fungus provides full comparison with other fungal extracellular vesicle proteomes and broadens the current view on fungal secretomes.

Indexed as

Cell-Derived MicroparticlesCluster AnalysisCryptococcus neoformansFungal ProteinsHistoplasmaMarkov ChainsParacoccidioidesPhosphoric Monoester HydrolasesProteomeSaccharomyces cerevisiaeFungal ProteinsPhosphoric Monoester HydrolasesProteome

Identifiers

PMID22288420
PMCPMC3319080
OpenAlexW2001555960

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.