Evidence map›Paper›PMID 22288418›Full record

ArticleAnalytical chemistry2012

Multiplexed nanoflares: mRNA detection in live cells.

Andrew E Prigodich, Pratik S Randeria, William E Briley, Nathaniel J Kim, Weston L Daniel, David A Giljohann, Chad A Mirkin

Abstract read
In one paragraph

Article in Analytical chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
12.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 284 citations in OpenAlex.

  1. Metal-Phenolic Coatings Enable Universal Design of Spherical Nucleic Acids.Angewandte Chemie (International ed. in English) · 2026
    Article
  2. Article
  3. Nucleic Acid-Modified Nanoparticles for Cancer Therapeutic Applications.Small (Weinheim an der Bergstrasse, Germany) · 2025
    Review
  4. Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. SmartFlareWorld journal of stem cells · 2021
    Article
  12. Review
  13. Review
  14. Different Approaches to Develop Nanosensors for Diagnosis of Diseases.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2020
    Review
  15. Logic Gates Based on DNA Aptamers.Pharmaceuticals (Basel, Switzerland) · 2020
    Review
  16. Article
  17. Defining the Design Parameters forACS central science · 2020
    Article
  18. Nucleic-Acid Structures as Intracellular Probes for Live Cells.Advanced materials (Deerfield Beach, Fla.) · 2020
    Review
  19. Article
  20. Effect of serum on SmartFlare™ RNA Probes uptake and detection in cultured human cells.Biomedical journal of scientific & technical research · 2020
    Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Andrew E PrigodichDepartment of Chemistry and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208-3113, USA.
Pratik S Randeria
William E Briley
Nathaniel J Kim
Weston L Daniel
David A Giljohann
Chad A Mirkin
Northwestern University · USExicure (United States) · US

Funding

Theranostic Magnetic Nanostructures for the Molecular Imaging of CancerU54CA151880 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI MIRKIN, CHAD A. · 2010 to 2014
$11.5M
NCI NIH HHS U54 CA151880NCI NIH HHS U54CA151880
6 · The paper itself

Abstract

We report the development of the multiplexed nanoflare, a nanoparticle agent that is capable of simultaneously detecting two distinct mRNA targets inside a living cell. These probes are spherical nucleic acid (SNA) gold nanoparticle (Au NP) conjugates consisting of densely packed and highly oriented oligonucleotide sequences, many of which are hybridized to a reporter with a distinct fluorophore label and each complementary to its corresponding mRNA target. When multiplexed nanoflares are exposed to their targets, they provide a sequence specific signal in both extra- and intracellular environments. Importantly, one of the targets can be used as an internal control, improving detection by accounting for cell-to-cell variations in nanoparticle uptake and background. Compared to single-component nanoflares, these structures allow one to determine more precisely relative mRNA levels in individual cells, improving cell sorting and quantification.

Indexed as

Fluorescent DyesFlow CytometryGoldHumansInhibitor of Apoptosis ProteinsMetal NanoparticlesNanoparticlesNeoplasmsNucleic Acid HybridizationReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionRNA, MessengerSurvivinTumor Cells, CulturedBIRC5 protein, humanFluorescent DyesGoldInhibitor of Apoptosis ProteinsRNA, MessengerSurvivin

Identifiers

PMID22288418
PMCPMC3357311
OpenAlexW2137158680

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.