Evidence map›Paper›PMID 22288412›Full record

ReviewCurrent pharmaceutical design2012

The ligand binding region of the sigma-1 receptor: studies utilizing photoaffinity probes, sphingosine and N-alkylamines.

Arnold E Ruoho, Uyen B Chu, Subramaniam Ramachandran, Dominique Fontanilla, Timur Mavlyutov, Abdol R Hajipour

Open access · greenAbstract readReview
In one paragraph

Review in Current pharmaceutical design, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Sphingoid Bases Regulate the Sigma-1 Receptor-Sphingosine andInternational journal of molecular sciences · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Synthesis, radiolabelling, and evaluation of [American journal of nuclear medicine and molecular imaging · 2018
    Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Arnold E RuohoDepartment of Neuroscience and the UW Eye Research Institute, University of Wisconsin School of Medicine and Public Health, Madison, WI 53706, USA. aeruoho@wisc.edu
Uyen B Chu
Subramaniam Ramachandran
Dominique Fontanilla
Timur Mavlyutov
Abdol R Hajipour
University of Wisconsin–Madison · US

Funding

STRUCTURE OF THE BETA-ADRENERGIC RECEPTOR-CYCLASE SYSTEMR01GM033138 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI RUOHO, ARNOLD EINO · 1985 to 2011
$3.1M
Sigma Receptor Structure/Function/K+ Channel ModulationR01MH065503 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI RUOHO, ARNOLD EINO · 2003 to 2007
$1.6M
NIGMS NIH HHS GM-33138NIGMS NIH HHS R01 GM033138NIMH NIH HHS MH065503NIMH NIH HHS R01 MH065503
6 · The paper itself

Abstract

The sigma-1 receptor is a 26 kDa endoplasmic reticulum resident membrane protein that has been shown to have chaperone activity in addition to its promiscuous binding to pharmacological agents. Ligand binding domain(s) of the sigma-1 receptor have been identified using the E. coli expressed and purified receptor protein and novel radioiodinated azido photoaffinity probes followed by proteolytic and chemical cleavage strategies. The outcome of these experiments indicates that the sigma-1 receptor ligand binding regions are formed primarily by juxtaposition of its second and third hydrophobic domains, regions where the protein shares considerable homology with the fungal enzyme, sterol isomerase that is essential for the biosynthesis of ergosterol. Data indicate that these hydrophobic steroid binding domain like (SBDL) regions on the sigma-1 receptor are likely to interact selectively with N-alkyl amines such as the endogenous sphingolipids and with synthetic N-alkylamines and N-aralkylamines derivatives. A proposed model for the sigma-1 receptor is presented.

Indexed as

Binding SitesAlkanesAminesHumansPhotoaffinity LabelsReceptors, sigmaSigma-1 ReceptorSphingosineAlkanesAminesPhotoaffinity LabelsReceptors, sigmaSigma-1 ReceptorSphingosine

Identifiers

PMID22288412
PMCPMC4440231
OpenAlexW2047511397

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.