Evidence map›Paper›PMID 22286872›Full record

ArticleAmino acids2012

The α-defensin salt-bridge induces backbone stability to facilitate folding and confer proteolytic resistance.

Håkan S Andersson, Sharel M Figueredo, Linda M Haugaard-Kedström, Elina Bengtsson, Norelle L Daly, Xiaoqing Qu, David J Craik, André J Ouellette, K Johan Rosengren

Abstract read
In one paragraph

Article in Amino acids, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 35 citations in OpenAlex.

  1. Exploring the Terra incognita of AI-based domain classifications.Protein science : a publication of the Protein Society · 2025
    Article
  2. Review
  3. Deciphering the folding code of collagens.Nature communications · 2025
    Article
  4. Antimicrobial Peptide Synergies for Fighting Infectious Diseases.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2023
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Salt bridge as a gatekeeper against partial unfolding.Protein science : a publication of the Protein Society · 2016
    Article
  12. Article
  13. Article
  14. Free energy landscape of a minimalist salt bridge model.Protein science : a publication of the Protein Society · 2016
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Håkan S AnderssonSchool of Natural Sciences, Linnaeus University, 39182 Kalmar, Sweden.
Sharel M Figueredo
Linda M Haugaard-Kedström
Elina Bengtsson
Norelle L Daly
Xiaoqing Qu
David J Craik
André J Ouellette
K Johan Rosengren
Linnaeus University · SEUSC Norris Comprehensive Cancer Center · USUniversity of Queensland · AU

Funding

PEPTIDE EFFECTORS OF ENTERIC HOST DEFENSER01DK044632 · NIDDK · UNIVERSITY OF SOUTHERN CALIFORNIA · PI OUELLETTE, ANDRE J. · 1993 to 2010
$2.8M
STUDIES OF ALPHA-DEFENSINS IN PRIMATE INNATE IMMUNITYR01AI059346 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI OUELLETTE, ANDRE J. · 2006 to 2010
$1.7M
NIAID NIH HHS R01 AI059346NIDDK NIH HHS R01 DK044632
6 · The paper itself

Abstract

Salt-bridge interactions between acidic and basic amino acids contribute to the structural stability of proteins and to protein-protein interactions. A conserved salt-bridge is a canonical feature of the α-defensin antimicrobial peptide family, but the role of this common structural element has not been fully elucidated. We have investigated mouse Paneth cell α-defensincryptdin-4 (Crp4) and peptide variants with mutations at Arg7 or Glu15 residue positions to disrupt the salt-bridge and assess the consequences on Crp4 structure, function, and stability. NMR analyses showed that both (R7G)-Crp4 and (E15G)-Crp4 adopt native-like structures, evidence of fold plasticity that allows peptides to reshuffle side chains and stabilize the structure in the absence of the salt-bridge. In contrast, introduction of a large hydrophobic side chain at position 15, as in (E15L)-Crp4 cannot be accommodated in the context of the Crp4 primary structure. Regardless of which side of the salt-bridge was mutated, salt-bridge variants retained bactericidal peptide activity with differential microbicidal effects against certain bacterial cell targets, confirming that the salt-bridge does not determine bactericidal activity per se. The increased structural flexibility induced by salt-bridge disruption enhanced peptide sensitivity to proteolysis. Although sensitivity to proteolysis by MMP7 was unaffected by most Arg(7) and Glu(150 substitutions, every salt-bridge variant was degraded extensively by trypsin. Moreover, the salt-bridge facilitates adoption of the characteristic α-defensin fold as shown by the impaired in vitro refolding of (E15D)-proCrp4, the most conservative salt-bridge disrupting replacement. In Crp4, therefore, the canonical α-defensin salt-bridge facilitates adoption of the characteristic α-defensin fold, which decreases structural flexibility and confers resistance todegradation by proteinases.

Indexed as

alpha-DefensinsAmino Acid SequenceAnimalsAnti-Infective AgentsArginineGlutamic AcidGram-Negative BacteriaGram-Positive BacteriaHydrophobic and Hydrophilic InteractionsMagnetic Resonance SpectroscopyMatrix Metalloproteinase 7MiceMicrobial ViabilityMolecular Sequence DataMutationPaneth Cellsalpha-DefensinsAnti-Infective AgentsArgininecryptdin 4, mouseGlutamic AcidMatrix Metalloproteinase 7Recombinant Fusion ProteinsSaltsTrypsin

Identifiers

PMID22286872
PMCPMC4086743
OpenAlexW2087285007

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.