Evidence map›Paper›PMID 22286219›Full record

SynthesisNature genetics2012

Genome-wide association study identifies multiple loci influencing human serum metabolite levels.

Johannes Kettunen, Taru Tukiainen, Antti-Pekka Sarin, Alfredo Ortega-Alonso, Emmi Tikkanen, Leo-Pekka Lyytikäinen, Antti J Kangas, Pasi Soininen, Peter Würtz, Kaisa Silander and 21 more

Registry-linked trialAbstract readMeta-AnalysisTwin Study
In one paragraph

Synthesis in Nature genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05495074 (Design of a Genetic Score to Predict the Response to a Dietary Intervention in Adults With Metabolic Syndrome), which is not on this map. Cited by 342 papers, 11 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
342citing papers in PubMed, 11 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05495074 nacompletednot on this mapstarted 2021, after this paper: background citation

Design of a Genetic Score to Predict the Response to a Dietary Intervention in Adults With Metabolic Syndrome

TypeinterventionalSponsorInstituto Nacional de Ciencias Medicas y Nutricion Salvador ZubiranRan2021 to 2024Enrolled115ConditionsMetabolic SyndromeArmsATP III dietary intervention
3 · Its place in the literature

Who cites it

342 citing papers in PubMed, 11 syntheses or guidelines pooled it.

  1. Use of Mendelian Randomization to Unveil Metabolic Markers inJournal of Korean medical science · 2026
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  3. Large-scale Integrated Analysis of Genetics and Metabolomic Data Reveals Potential Links Between Lipids and Colorectal Cancer Risk.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2022
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282 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

31 authors.

Johannes KettunenInstitute for Molecular Medicine Finland, University of Helsinki, Finland.
Taru Tukiainen
Antti-Pekka Sarin
Alfredo Ortega-Alonso
Emmi Tikkanen
Leo-Pekka Lyytikäinen
Antti J Kangas
Pasi Soininen
Peter Würtz
Kaisa Silander
Danielle M Dick
Richard J Rose
Markku J Savolainen
Jorma Viikari
Mika Kähönen
Terho Lehtimäki
Kirsi H Pietiläinen
Michael Inouye
Mark I McCarthy
Antti Jula
Johan Eriksson
Olli T Raitakari
Veikko Salomaa
Jaakko Kaprio
Marjo-Riitta Järvelin
Leena Peltonen
Markus Perola
Nelson B Freimer
Mika Ala-Korpela
Aarno Palotie
Samuli Ripatti

Funding

The development of alcohol misuse and related problems from adolescence to early midlifeR01AA015416 · NIAAA · WASHINGTON UNIVERSITY · PI DICK, DANIELLE M, SALVATORE, JESSICA E · 2005 to 2024
$7.6M
Genetics of cardiovascular risk factors in large founder population birth controlR01HL087679 · NHLBI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI HIRSCHHORN, JOEL N · 2007 to 2009
$4.0M
ADOLESCENT ALCOHOL ABUSE: A TWIN-STUDY PERSPECTIVER37AA012502 · NIAAA · TRUSTEES OF INDIANA UNIVERSITY · PI ROSE, RICHARD JOSEPH · 2000 to 2009
$2.9M
Whole Genome Assoc. Analysis Strategies for Multi. PhenotypesRL1MH083268 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI FREIMER, NELSON B. · 2007 to 2011
$2.1M
Twin, molecular, and developmental approaches to understanding alcohol misuseK02AA018755 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI DICK, DANIELLE M · 2010 to 2019
$1.3M
Adolescent Alcohol Abuse: A Twin-Study PerspectiveR01AA012502 · NIAAA · TRUSTEES OF INDIANA UNIVERSITY · PI ROSE, RICHARD JOSEPH · 2013 to 2017
$1.2M
BEHAVIORAL PRECURSORS OF ALCOHOLISM--TWIN FAMILY STUDIESR01AA009203 · NIAAA · INDIANA UNIVERSITY BLOOMINGTON · PI ROSE, RICHARD JOSEPH · 1994 to 1998
–
LONGITUDINAL TWIN-FAMILY STUDIES: USE &ABUSE OF ALCOHOLR01AA008315 · NIAAA · INDIANA UNIVERSITY BLOOMINGTON · PI ROSE, RICHARD JOSEPH · 1990 to 1994
–
Medical Research Council G0500539Medical Research Council G0600705NHLBI NIH HHS 5R01HL087679NHLBI NIH HHS R01 HL087679NIAAA NIH HHS AA-08315NIAAA NIH HHS AA-12502NIAAA NIH HHS AA-15416NIAAA NIH HHS K02 AA018755NIAAA NIH HHS R01 AA009203NIAAA NIH HHS R01 AA012502NIAAA NIH HHS R01 AA015416NIAAA NIH HHS R37 AA012502NIMH NIH HHS 1RL1MH083268NIMH NIH HHS RL1 MH083268Wellcome Trust 089062/Z/09/ZWellcome Trust 090532Wellcome Trust 098051Wellcome Trust 89061/Z/09/ZWellcome Trust GR069224
6 · The paper itself

Abstract

Nuclear magnetic resonance assays allow for measurement of a wide range of metabolic phenotypes. We report here the results of a GWAS on 8,330 Finnish individuals genotyped and imputed at 7.7 million SNPs for a range of 216 serum metabolic phenotypes assessed by NMR of serum samples. We identified significant associations (P < 2.31 × 10(-10)) at 31 loci, including 11 for which there have not been previous reports of associations to a metabolic trait or disorder. Analyses of Finnish twin pairs suggested that the metabolic measures reported here show higher heritability than comparable conventional metabolic phenotypes. In accordance with our expectations, SNPs at the 31 loci associated with individual metabolites account for a greater proportion of the genetic component of trait variance (up to 40%) than is typically observed for conventional serum metabolic phenotypes. The identification of such associations may provide substantial insight into cardiometabolic disorders.

Indexed as

MetabolomePhenotypeAmino AcidsAnalysis of VarianceFinlandGenome-Wide Association StudyGenotypeHumansInheritance PatternsLipid MetabolismMagnetic Resonance SpectroscopyPolymorphism, Single NucleotideQuantitative Trait LociSerumAmino Acids

Identifiers

PMID22286219
PMCPMC3605033

What OpenQuestion holds

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Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.