Evidence map›Paper›PMID 22285925›Full record

ArticleGene2012

An arrayed human genomic library constructed in the PAC shuttle vector pJCPAC-Mam2 for genome-wide association studies and gene therapy.

John Fuesler, Yasunori Nagahama, Joseph Szulewski, Joshua Mundorff, Stephanie Bireley, Jonathon S Coren

Abstract read
In one paragraph

Article in Gene, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

John FueslerDepartment of Biology, Elizabethtown College, Elizabethtown, PA 17022, USA.
Yasunori Nagahama
Joseph Szulewski
Joshua Mundorff
Stephanie Bireley
Jonathon S Coren
Elizabethtown College · US

Funding

Expansion of the human genomic PAC expression libraryR15HG002216 · NHGRI · SOUTHWESTERN OKLAHOMA STATE UNIVERSITY · PI COREN, JONATHON SILOW · 2001 to 2001
$121k
NHGRI NIH HHS R15 HG002216
6 · The paper itself

Abstract

The various iterations of the HapMap Project and many genome-wide association studies (GWAS) have identified hundreds of potential genes involved in monogenic and multifactorial traits. We constructed an arrayed 115,000-member human genomic library in the PAC shuttle vector pJCPAC-Mam2 that can be propagated in both bacterial and human cells. The library appears to represent a two-fold coverage of the human genome. Transient transfection of a p53-containing PAC clone into p53-null Saos-2 human osteosarcoma cells demonstrated that both p53 mRNA and protein were produced. Additionally, expression of the p53 protein triggered apoptosis in a subset of the Saos-2 cells. This library should serve as a valuable resource to validate potential disease genes identified by GWAS in human cell lines and in animal models. Also, individual library members could potentially be used for gene therapy trials for a variety of recessive disorders.

Indexed as

Genetic VectorsGenomic LibraryHapMap ProjectApoptosisCell Line, TumorCloning, MolecularGenes, p53Genetic TherapyGenome-Wide Association StudyGenomicsGreen Fluorescent ProteinsHumansOsteosarcomaProtein BiosynthesisTranscription, GeneticTumor Suppressor Protein p53Green Fluorescent ProteinsTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID22285925
PMCPMC3488463
OpenAlexW2030900460

What OpenQuestion holds

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LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.