Evidence map›Paper›PMID 22285574›Full record

ReviewBiochimica et biophysica acta2012

Chromatin dynamics in DNA double-strand break repair.

Lei Shi, Philipp Oberdoerffer

Open access · greenAbstract readReview
In one paragraph

Review in Biochimica et biophysica acta, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Chromatin Remodeling and Epigenetic Regulation in Plant DNA Damage Repair.International journal of molecular sciences · 2019
    Review
  14. Review
  15. Article
  16. The role of ubiquitin-dependent segregase p97 (VCP or Cdc48) in chromatin dynamics after DNA double strand breaks.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
  17. Article
  18. Article
  19. Article
  20. [Epigenetic effects of human breastfeeding].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Lei ShiMouse Cancer Genetics Program, NCI- Frederick, NIH, Frederick, MD 21702, USA.
Philipp Oberdoerffer
Cancer Research Center · US

Funding

Investigating the role of DNA breaks in mammalian agingZIABC011283 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI OBERDOERFFER, PHILIPP · 2010 to 2019
$4.3M
RNAi screen for modifiers of homologous recombinationZIABC011282 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI OBERDOERFFER, PHILIPP · 2010 to 2017
$3.7M
Intramural NIH HHS ZIA BC011282
6 · The paper itself

Abstract

DNA double-strand breaks (DSBs) occur in the context of a highly organized chromatin environment and are, thus, a significant threat to the epigenomic integrity of eukaryotic cells. Changes in break-proximal chromatin structure are thought to be a prerequisite for efficient DNA repair and may help protect the structural integrity of the nucleus. Unlike most bona fide DNA repair factors, chromatin influences the repair process at several levels: the existing chromatin context at the site of damage directly affects the access and kinetics of the repair machinery; DSB induced chromatin modifications influence the choice of repair factors, thereby modulating repair outcome; lastly, DNA damage can have a significant impact on chromatin beyond the site of damage. We will discuss recent findings that highlight both the complexity and importance of dynamic and tightly orchestrated chromatin reorganization to ensure efficient DSB repair and nuclear integrity. This article is part of a Special Issue entitled: Chromatin in time and space.

Indexed as

Chromatin Assembly and DisassemblyDNA Breaks, Double-StrandedDNA RepairAnimalsCell NucleusCellular SenescenceDNA ReplicationHeterochromatinHistonesHumansIntracellular Signaling Peptides and ProteinsNucleosomesProtein Processing, Post-TranslationalTumor Suppressor p53-Binding Protein 1HeterochromatinHistonesIntracellular Signaling Peptides and ProteinsNucleosomesTP53BP1 protein, humanTumor Suppressor p53-Binding Protein 1

Identifiers

PMID22285574
PMCPMC3368990
OpenAlexW2093797023

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.