Evidence map›Paper›PMID 22283524›Full record

ArticleMolecular microbiology2012

An Aspergillus nidulans bZIP response pathway hardwired for defensive secondary metabolism operates through aflR.

Wen-Bing Yin, Saori Amaike, Dana J Wohlbach, Audrey P Gasch, Yi-Ming Chiang, Clay C C Wang, Jin Woo Bok, Marko Rohlfs, Nancy P Keller

Abstract read
In one paragraph

Article in Molecular microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 101 citations in OpenAlex.

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  9. Synthetic and systems biotechnology · 2022
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  11. Review
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  14. Article
  15. The impact of bZIP Atf1ortholog global regulators in fungi.Applied microbiology and biotechnology · 2021
    Review
  16. Acid pH Strategy Adaptation throughJournal of fungi (Basel, Switzerland) · 2021
    Article
  17. Article
  18. Fungal evolution: cellular, genomic and metabolic complexity.Biological reviews of the Cambridge Philosophical Society · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Wen-Bing YinDepartments of Medical Microbiology and Immunology Plant Pathology Genetics Bacteriology, University of Wisconsin-Madison, WI, USA.
Saori Amaike
Dana J Wohlbach
Audrey P Gasch
Yi-Ming Chiang
Clay C C Wang
Jin Woo Bok
Marko Rohlfs
Nancy P Keller
University of Southern California · USPlanta · RUUniversity of Wisconsin–Madison · US

Funding

Molecular Genetic Mining of the Aspergillus Nidulans Secondary MetabolomeP01GM084077 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI OAKLEY, BERL RAY · 2008 to 2012
$5.4M
Functional Genomics of Stress Defense in YeastR01GM083989 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI GASCH, AUDREY · 2008 to 2016
$3.0M
NIGMS NIH HHS P01 GM084077NIGMS NIH HHS P01GM084077NIGMS NIH HHS R01 GM083989NIGMS NIH HHS R01GM083989-01
6 · The paper itself

Abstract

The eukaryotic bZIP transcription factors are critical players in organismal response to environmental challenges. In fungi, the production of secondary metabolites (SMs) is hypothesized as one of the responses to environmental insults, e.g. attack by fungivorous insects, yet little data to support this hypothesis exists. Here we establish a mechanism of bZIP regulation of SMs through RsmA, a recently discovered YAP-like bZIP protein. RsmA greatly increases SM production by binding to two sites in the Aspergillus nidulans AflR promoter region, a C6 transcription factor known for activating production of the carcinogenic and anti-predation SM, sterigmatocystin. Deletion of aflR in an overexpression rsmA (OE:rsmA) background not only eliminates sterigmatocystin production but also significantly reduces asperthecin synthesis. Furthermore, the fungivore, Folsomia candida, exhibited a distinct preference for feeding on wild type rather than an OE:rsmA strain. RsmA may thus have a critical function in mediating direct chemical resistance against predation. Taken together, these results suggest RsmA represents a bZIP pathway hardwired for defensive SM production.

Indexed as

AnimalsAspergillus nidulansBasic-Leucine Zipper Transcription FactorsDNA-Binding ProteinsFungal ProteinsGene Expression Regulation, FungalInsectaPromoter Regions, GeneticSterigmatocystinTranscription FactorsAFLR protein, AspergillusBasic-Leucine Zipper Transcription FactorsDNA-Binding ProteinsFungal ProteinsSterigmatocystinTranscription Factors

Identifiers

PMID22283524
PMCPMC3288630
OpenAlexW1903107055

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.