Evidence map›Paper›PMID 22279533›Full record

ArticlePloS one2012

A riboswitch-based inducible gene expression system for mycobacteria.

Jessica C Seeliger, Shana Topp, Kimberly M Sogi, Mary L Previti, Justin P Gallivan, Carolyn R Bertozzi

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 62 citations in OpenAlex.

  1. The mycomembrane proteins PorH and ProtX are inserted at polar growth zones and linked to the cell wall.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  8. A Riboswitch-Driven Era of New Antibacterials.Antibiotics (Basel, Switzerland) · 2022
    Review
  9. Persistence ofFrontiers in cellular and infection microbiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jessica C SeeligerDepartment of Pharmacological Sciences, Stony Brook University, Stony Brook, New York, United States of America.
Shana Topp
Kimberly M Sogi
Mary L Previti
Justin P Gallivan
Carolyn R Bertozzi
University of California, Berkeley · USStony Brook University · USEmory University · US

Funding

Mycobacterial Sulfation PathwaysR01AI051622 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI BERTOZZI, CAROLYN · 2002 to 2015
$6.0M
Chemical MycobateriologyR37AI051622 · NIAID · STANFORD UNIVERSITY · PI BERTOZZI, CAROLYN · 2016 to 2025
$4.7M
RNA-Mediated Genetic Selections for Small MoleculesR01GM074070 · NIGMS · EMORY UNIVERSITY · PI GALLIVAN, JUSTIN P · 2006 to 2010
$1.2M
NIAID NIH HHS AI51622NIAID NIH HHS R01 AI051622NIAID NIH HHS R37 AI051622NIGMS NIH HHS GM074070NIGMS NIH HHS R01 GM074070
6 · The paper itself

Abstract

Research on the human pathogen Mycobacterium tuberculosis (Mtb) would benefit from novel tools for regulated gene expression. Here we describe the characterization and application of a synthetic riboswitch-based system, which comprises a mycobacterial promoter for transcriptional control and a riboswitch for translational control. The system was used to induce and repress heterologous protein overexpression reversibly, to create a conditional gene knockdown, and to control gene expression in a macrophage infection model. Unlike existing systems for controlling gene expression in Mtb, the riboswitch does not require the co-expression of any accessory proteins: all of the regulatory machinery is encoded by a short DNA segment directly upstream of the target gene. The inducible riboswitch platform has the potential to be a powerful general strategy for creating customized gene regulation systems in Mtb.

Indexed as

Gene Expression Regulation, BacterialAnimalsBacterial ProteinsBase Sequencebeta-GalactosidaseCatalaseCell LineFlow CytometryGreen Fluorescent ProteinsHumansImmunoblottingMacrophagesMiceMicroscopy, FluorescenceMolecular Sequence DataMutagenesis, Site-DirectedBacterial Proteinsbeta-GalactosidaseCatalaseGreen Fluorescent ProteinskatG protein, Mycobacterium tuberculosisRiboswitchTheophylline

Identifiers

PMID22279533
PMCPMC3261144
OpenAlexW2067547134

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.