Evidence map›Paper›PMID 22279528›Full record

ArticlePloS one2012

Largazole and its derivatives selectively inhibit ubiquitin activating enzyme (e1).

Dana Ungermannova, Seth J Parker, Christopher G Nasveschuk, Wei Wang, Bettina Quade, Gan Zhang, Robert D Kuchta, Andrew J Phillips, Xuedong Liu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 65 citations in OpenAlex.

  1. Review
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  8. Natural Cyclopeptides as Anticancer Agents in the Last 20 Years.International journal of molecular sciences · 2021
    Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
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  17. A patent review of the ubiquitin ligase system: 2015-2018.Expert opinion on therapeutic patents · 2018
    Review
  18. Review
  19. Review
  20. An overview of naturally occurring histone deacetylase inhibitors.Current topics in medicinal chemistry · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Dana UngermannovaDepartment of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, United States of America.
Seth J Parker
Christopher G Nasveschuk
Wei Wang
Bettina Quade
Gan Zhang
Robert D Kuchta
Andrew J Phillips
Xuedong Liu
University of Colorado Boulder · USYale University · US

Funding

Mechanisms of p27Kipl Proteolysis in Cancer CellsR01CA107098 · NCI · UNIVERSITY OF COLORADO AT BOULDER · PI LIU, XUEDONG · 2004 to 2012
$2.7M
ImageXpress Micro Cellular Imagining and Analysis SystemS10RR026680 · NCRR · UNIVERSITY OF COLORADO · PI LIU, XUEDONG · 2011 to 2011
$380k
NCI NIH HHS CA107089NCI NIH HHS R01 CA107098NCRR NIH HHS S10 RR026680
6 · The paper itself

Abstract

Protein ubiquitination plays an important role in the regulation of almost every aspect of eukaryotic cellular function; therefore, its destabilization is often observed in most human diseases and cancers. Consequently, developing inhibitors of the ubiquitination system for the treatment of cancer has been a recent area of interest. Currently, only a few classes of compounds have been discovered to inhibit the ubiquitin-activating enzyme (E1) and only one class is relatively selective in E1 inhibition in cells. We now report that Largazole and its ester and ketone analogs selectively inhibit ubiquitin conjugation to p27(Kip1) and TRF1 in vitro. The inhibitory activity of these small molecules on ubiquitin conjugation has been traced to their inhibition of the ubiquitin E1 enzyme. To further dissect the mechanism of E1 inhibition, we analyzed the effects of these inhibitors on each of the two steps of E1 activation. We show that Largazole and its derivatives specifically inhibit the adenylation step of the E1 reaction while having no effect on thioester bond formation between ubiquitin and E1. E1 inhibition appears to be specific to human E1 as Largazole ketone fails to inhibit the activation of Uba1p, a homolog of E1 in Schizosaccharomyces pombe. Moreover, Largazole analogs do not significantly inhibit SUMO E1. Thus, Largazole and select analogs are a novel class of ubiquitin E1 inhibitors and valuable tools for studying ubiquitination in vitro. This class of compounds could be further developed and potentially be a useful tool in cells.

Indexed as

AdenineAnimalsCell LineCyclin-Dependent Kinase Inhibitor p27DepsipeptidesDose-Response Relationship, DrugElectrophoresis, Polyacrylamide GelEnzyme ActivationGreen Fluorescent ProteinsHEK293 CellsHumansImmunoblottingMolecular StructureTelomeric Repeat Binding Protein 1ThiazolesTransfectionAdenineCyclin-Dependent Kinase Inhibitor p27DepsipeptidesGreen Fluorescent ProteinslargazoleTelomeric Repeat Binding Protein 1ThiazolesUBA1 protein, humanUbiquitinUbiquitin-Activating Enzymes

Identifiers

PMID22279528
PMCPMC3261141
OpenAlexW1963759365

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.