Evidence map›Paper›PMID 22278768›Full record

ArticlePlant molecular biology2012

Divergent functions of orthologous NAC transcription factors in wheat and rice.

Assaf Distelfeld, Stephen P Pearce, Raz Avni, Beatrice Scherer, Cristobal Uauy, Fernando Piston, Ann Slade, Rongrong Zhao, Jorge Dubcovsky

Open access · greenAbstract read
In one paragraph

Article in Plant molecular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
11.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 97 citations in OpenAlex.

  1. Genome-wide association study and transcriptomic analysis reveal new genes for unsaturated fatty acid contents in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  2. Article
  3. Wheat NAC transcription factorPlant direct · 2024
    Article
  4. Article
  5. Review
  6. Review
  7. International journal of molecular sciences · 2022
    Review
  8. Characterization and Functional Analysis ofPlants (Basel, Switzerland) · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Functional Validation ofInternational journal of molecular sciences · 2020
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Assaf DistelfeldDepartment of Plant Sciences, University of California, Davis, CA 95616, USA.
Stephen P Pearce
Raz Avni
Beatrice Scherer
Cristobal Uauy
Fernando Piston
Ann Slade
Rongrong Zhao
Jorge Dubcovsky
University of California System · USUniversity of California, Davis · USArcadia Biosciences (United States) · USTel Aviv University · IL

Funding

Biotechnology and Biological Sciences Research Council BBS/E/J/000C0628Howard Hughes Medical Institute
6 · The paper itself

Abstract

The wheat GPC-B1 gene located on chromosome 6B is an early regulator of senescence and affects remobilization of protein and minerals to the grain. GPC-B1 is a NAC transcription factor and has a paralogous copy on chromosome 2B in wheat, GPC-B2. The closest rice homolog to both wheat GPC genes is Os07g37920 which is located on rice chromosome 7 and is colinear with GPC-B2. Since rice is a diploid species with a sequenced genome, we initiated the study of Os07g37920 to develop a simpler model to study senescence and mineral remobilization in cereals. We developed eleven independent RNA interference transgenic rice lines (Os07g37920-RNAi) and 10 over-expressing transgenic lines (Os07g37920-OE), but none of them showed differences in senescence. Transgenic Os07g37920-RNAi rice plants had reduced proportions of viable pollen grains and were male-sterile, but were able to produce seeds by cross pollination. Analysis of the flower morphology of the transgenic rice plants showed that anthers failed to dehisce. Transgenic Os07g37920-OE lines showed no sterility or anther dehiscence problems. Os07g37920 transcript levels were higher in stamens compared to leaves and significantly reduced in the transgenic Os07g37920-RNAi plants. Wheat GPC genes showed the opposite transcription profile (higher transcript levels in leaves than in flowers) and plants carrying knock-out mutations of all GPC-1 and GPC-2 genes exhibited delayed senescence but normal anther dehiscence and fertility. These results indicate a functional divergence of the homologous wheat and rice NAC genes and suggest the need for separate studies of the function and targets of these transcription factors in wheat and rice.

Indexed as

AgingChromosomes, PlantEvolution, MolecularFlowersGene Knockout TechniquesModels, GeneticOryzaPhylogenyPlant LeavesPlant ProteinsPlants, Genetically ModifiedPollinationRNA InterferenceSeedsTranscription FactorsTriticumPlant ProteinsTranscription Factors

Identifiers

PMID22278768
PMCPMC4773031
OpenAlexW1972134773

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.