Evidence map›Paper›PMID 22278669›Full record

ArticleThe ISME journal2012

Expression of the blood-group-related glycosyltransferase B4galnt2 influences the intestinal microbiota in mice.

Fabian Staubach, Sven Künzel, Andrea C Baines, Andrew Yee, Beth M McGee, Fredrik Bäckhed, John F Baines, Jill M Johnsen

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
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  5. The story of the SdGlycoconjugate journal · 2023
    Review
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  11. Review
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  14. Article
  15. Review
  16. Review
  17. Review
  18. Predicted Bacterial Interactions AffectFrontiers in microbiology · 2018
    Article
  19. Article
  20. Utilization of Host-Derived Glycans by IntestinalFrontiers in microbiology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Fabian StaubachDepartment of Evolutionary Genetics, Max Planck Institute for Evolutionary Biology, Plön, Germany.
Sven Künzel
Andrea C Baines
Andrew Yee
Beth M McGee
Fredrik Bäckhed
John F Baines
Jill M Johnsen
Max Planck Institute for Evolutionary Biology · DEUniversity of Michigan–Ann Arbor · USHoward Hughes Medical Institute · USUniversity of Gothenburg · SEUniversity of Washington · US

Funding

Molecular Genetic Study of von Willebrand FactorR01HL039693 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GINSBURG, DAVID · 1989 to 2016
$2.4M
NHLBI NIH HHS R01 HL039693NHLBI NIH HHS R01-HL039693
6 · The paper itself

Abstract

Glycans on mucosal surfaces have an important role in host-microbe interactions. The locus encoding the blood-group-related glycosyltransferase β-1,4-N-acetylgalactosaminyltransferase 2 (B4galnt2) is subject to strong selective forces in natural house-mouse populations that contain a common allelic variant that confers loss of B4galnt2 gene expression in the gastrointestinal (GI) tract. We reasoned that altered glycan-dependent intestinal host-microbe interactions may underlie these signatures of selection. To determine whether B4galnt2 influences the intestinal microbial ecology, we profiled the microbiota of wild-type and B4galnt2-deficient siblings throughout the GI tract using 16S rRNA gene pyrosequencing. This revealed both distinct communities at different anatomic sites and significant changes in composition with respect to genotype, indicating a previously unappreciated role of B4galnt2 in host-microbial homeostasis. Among the numerous B4galnt2-dependent differences identified in the abundance of specific bacterial taxa, we unexpectedly detected a difference in the pathogenic genus, Helicobacter, suggesting Helicobacter spp. also interact with B4galnt2 glycans. In contrast to other glycosyltransferases, we found that the host intestinal B4galnt2 expression is not dependent on presence of the microbiota. Given the long-term maintenance of alleles influencing B4galnt2 expression by natural selection and the GI phenotypes presented here, we suggest that variation in B4galnt2 GI expression may alter susceptibility to GI diseases such as infectious gastroenteritis.

Indexed as

MetagenomeAnimalsBacteriaFemaleIntestinesMaleMiceMice, Inbred C57BLN-AcetylgalactosaminyltransferasesRNA, BacterialRNA, Ribosomal, 16SSelection, GeneticSpecific Pathogen-Free Organismsbeta-1,4-N-acetyl-galactosaminyl transferase 2N-AcetylgalactosaminyltransferasesRNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID22278669
PMCPMC3379640
OpenAlexW1966304632

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.