Evidence map›Paper›PMID 22277659›Full record

ArticleThe Journal of biological chemistry2012

Paramecium bursaria chlorella virus 1 encodes a polyamine acetyltransferase.

Zachary Charlop-Powers, Jean Jakoncic, James R Gurnon, James L Van Etten, Ming-Ming Zhou

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact, top 98% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 0 citations in OpenAlex.

  1. Review
  2. Review
  3. Functional polyamine metabolic enzymes and pathways encoded by the virosphere.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  4. Article
  5. Gcn5-RelatedFrontiers in molecular biosciences · 2021
    Article
  6. Review
  7. Chloroviruses.Viruses · 2019
    Review
  8. Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  9. Polyamines and Their Role in Virus Infection.Microbiology and molecular biology reviews : MMBR · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Zachary Charlop-PowersDepartment of Structural and Chemical Biology, Mount Sinai School of Medicine, New York, New York 10029, USA.
Jean Jakoncic
James R Gurnon
James L Van Etten
Ming-Ming Zhou
Icahn School of Medicine at Mount Sinai · USUniversity of Nebraska–Lincoln · USBrookhaven National Laboratory · US

Funding

Chemical Genomics Paradigm for Epigentic RegulationR01HG004508 · NHGRI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ZHOU, MING-MING · 2008 to 2014
$6.7M
STRUCTURE OF PROTEIN MODULES IN CHROMATIN REMODELINGR01CA087658 · NCI · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI ZHOU, MING-MING · 2000 to 2016
$4.8M
NEBRASKA CENTER FOR VIROLOGY: AIDSP30RR031151 · NCRR · UNIVERSITY OF NEBRASKA LINCOLN · PI WOOD, CHARLES · 2010 to 2011
$2.9M
NCI NIH HHS R01 CA087658NCI NIH HHS R01CA87658NCRR NIH HHS P30 RR031151NCRR NIH HHS P30RR31151NHGRI NIH HHS R01 HG004508NHGRI NIH HHS R01HG004508
6 · The paper itself

Abstract

Paramecium bursaria chlorella virus 1 (PBCV-1), a large DNA virus that infects green algae, encodes a histone H3 lysine 27-specific methyltransferase that functions in global transcriptional silencing of the host. PBCV-1 has another gene a654l that encodes a protein with sequence similarity to the GCN5 family histone acetyltransferases. In this study, we report a 1.5 Å crystal structure of PBCV-1 A654L in a complex with coenzyme A. The structure reveals a unique feature of A654L that precludes its acetylation of histone peptide substrates. We demonstrate that A654L, hence named viral polyamine acetyltransferase (vPAT), acetylates polyamines such as putrescine, spermidine, cadaverine, and homospermidine present in both PBCV-1 and its host through a reaction dependent upon a conserved glutamate 27. Our study suggests that as the first virally encoded polyamine acetyltransferase, vPAT plays a possible key role in the regulation of polyamine catabolism in the host during viral replication.

Indexed as

AcetyltransferasesCrystallography, X-RayHistonesKineticsPhycodnaviridaePolyaminesViral ProteinsAcetyltransferasesHistonesPolyaminesViral Proteins

Identifiers

PMID22277659
PMCPMC3308761
OpenAlexW654904638

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.