Evidence map›Paper›PMID 22276125›Full record

ArticlePloS one2012

Role of the RNA-binding protein Nrd1 in stress granule formation and its implication in the stress response in fission yeast.

Ryosuke Satoh, Akitomo Tanaka, Ayako Kita, Takahiro Morita, Yasuhiro Matsumura, Nanae Umeda, Makoto Takada, Sachiko Hayashi, Tokio Tani, Kaori Shinmyozu and 1 more

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In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Ryosuke SatohLaboratory of Molecular Pharmacogenomics, School of Pharmaceutical Sciences, Kinki University, Osaka, Japan.
Akitomo Tanaka
Ayako Kita
Takahiro Morita
Yasuhiro Matsumura
Nanae Umeda
Makoto Takada
Sachiko Hayashi
Tokio Tani
Kaori Shinmyozu
Reiko Sugiura
Kindai University · JPKumamoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have previously identified the RNA recognition motif (RRM)-type RNA-binding protein Nrd1 as an important regulator of the posttranscriptional expression of myosin in fission yeast. Pmk1 MAPK-dependent phosphorylation negatively regulates the RNA-binding activity of Nrd1. Here, we report the role of Nrd1 in stress-induced RNA granules. Nrd1 can localize to poly(A)-binding protein (Pabp)-positive RNA granules in response to various stress stimuli, including heat shock, arsenite treatment, and oxidative stress. Interestingly, compared with the unphosphorylatable Nrd1, Nrd1(DD) (phosphorylation-mimic version of Nrd1) translocates more quickly from the cytoplasm to the stress granules in response to various stimuli; this suggests that the phosphorylation of Nrd1 by MAPK enhances its localization to stress-induced cytoplasmic granules. Nrd1 binds to Cpc2 (fission yeast RACK) in a phosphorylation-dependent manner and deletion of Cpc2 affects the formation of Nrd1-positive granules upon arsenite treatment. Moreover, the depletion of Nrd1 leads to a delay in Pabp-positive RNA granule formation, and overexpression of Nrd1 results in an increased size and number of Pabp-positive granules. Interestingly, Nrd1 deletion induced resistance to sustained stresses and enhanced sensitivity to transient stresses. In conclusion, our results indicate that Nrd1 plays a role in stress-induced granule formation, which affects stress resistance in fission yeast.

Indexed as

ArsenitesCadmium ChlorideHydrogen PeroxidePotassium ChlorideProtein BindingReceptors, Cell SurfaceReceptors for Activated C KinaseRibonucleoproteinsRNA, FungalSchizosaccharomycesSchizosaccharomyces pombe ProteinsSodium CompoundsTemperatureArsenitesCadmium Chloridecpc2 protein, S pombeHydrogen Peroxidenrd1 protein, S pombePotassium ChlorideReceptors, Cell SurfaceReceptors for Activated C KinaseRibonucleoproteinsRNA, FungalSchizosaccharomyces pombe Proteinssodium arseniteSodium Compounds

Identifiers

PMID22276125
PMCPMC3261880
OpenAlexW2052761538

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.