Evidence map›Paper›PMID 22275070›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2012

Identification of putative retinoic acid target genes downstream of mesenchymal Tbx1 during inner ear development.

Dennis C Monks, Bernice E Morrow

Open access · bronzeAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Biology · 2023
    Article
  2. Sculpting the skull through neurosensory epithelial-mesenchymal signaling.Developmental dynamics : an official publication of the American Association of Anatomists · 2019
    Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Tbx1 is a negative modulator of Mef2c.Human molecular genetics · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Dennis C MonksDepartment of Genetics, Albert Einstein College of Medicine, Bronx, New York 10461, USA.
Bernice E Morrow
Albert Einstein College of Medicine · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007288 · NIGMS · YESHIVA UNIVERSITY · PI AKABAS, MYLES H. · 1985 to 2022
$35.6M
Project 2: Genetic Mechanisms of Non-syndromic Congenital Cardiac DefectsP01HD070454 · NICHD · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI GOLDMUNTZ, ELIZABETH · 2011 to 2020
$14.0M
Genetic Analysis of Tbx1 in Ear DisordersR01DC005186 · NIDCD · YESHIVA UNIVERSITY · PI MORROW, BERNICE E · 2003 to 2013
$3.6M
Developmental Genetics of the Pharyngeal ApparatusR01HL088698 · NHLBI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI MORROW, BERNICE E · 2009 to 2010
$827k
NHLBI NIH HHS R01 HL088698NICHD NIH HHS P01 HD070454NIDCD NIH HHS DC05186NIDCD NIH HHS R01 DC005186NIGMS NIH HHS T32 GM007288
6 · The paper itself

Abstract

backgroundThe T-box transcription factor Tbx1 is expressed in the otic vesicle and surrounding mesoderm of the periotic mesenchyme (POM) during inner ear development. Mesenchymal Tbx1 is essential for inner ear development, with conditional mutants displaying defects in both the auditory and vestibular systems. We have previously reported that mesodermal Tbx1 loss of function mutants (Mest-KO) have reduced expression of retinoic acid (RA) metabolic genes, Cyp26a1 and Cyp26c1, in the POM, consistent with other studies showing an increase in mesodermal RA reporter expression in Tbx1-/- embryos. However, putative RA effector genes whose expression is altered downstream of increased otic mesenchymal-epithelial RA signaling have remained elusive.

resultsHere we report the identification of 18 retinoic acid responsive genes altered in Mest-KO conditional mutants by microarray gene profiling. Nine were chosen for biological validation including quantitative RT-PCR and in situ hybridization (Otor, Mia, Col2a1, Clu, Adm, Myt1, Dlx3, Itgb3, and Itga2b).

conclusionHere study provides a series of newly identified RA effector genes for inner ear development downstream of mesenchymal Tbx1 that may contribute to the inner ear phenotype observed in Tbx1 loss of function mouse models.

Indexed as

AnimalsEar, InnerGene ExpressionGene Expression ProfilingGene Expression Regulation, DevelopmentalHaploinsufficiencyMesodermMiceMice, KnockoutOligonucleotide Array Sequence AnalysisT-Box Domain ProteinsTretinoinT-Box Domain ProteinsTbx1 protein, mouseTretinoin

Identifiers

PMID22275070
PMCPMC3282991
OpenAlexW2149204706

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.