Evidence map›Paper›PMID 22272256›Full record

ArticlePloS one2012

Continuous and long-term volume measurements with a commercial Coulter counter.

Andrea K Bryan, Alex Engler, Amneet Gulati, Scott R Manalis

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
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  5. Microfluidic Single-Cell Analytics.Advances in biochemical engineering/biotechnology · 2022
    Article
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  11. Review
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  13. Large population cell characterization using quantitative phase cytometer.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2017
    Article
  14. Article
  15. Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Andrea K BryanDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Alex Engler
Amneet Gulati
Scott R Manalis
Massachusetts Institute of Technology · US

Funding

TRANS-NETWORK PROJECTSU54CA143874 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI CHAKRABORTY, ARUP K. · 2009 to 2013
$15.1M
High throughput monitoring of mass, density and fluorescence of single cellsR01GM085457 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI MANALIS, SCOTT R · 2008 to 2011
$1.2M
Developing a single cell growth monitor for classifying therapeutic responseR21CA137695 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI MALLICK, PARAG KUMAR, MANALIS, SCOTT R · 2009 to 2011
$746k
NCI NIH HHS R21 CA137695NCI NIH HHS R21CA137695NCI NIH HHS U54 CA143874NCI NIH HHS U54CA143874NIGMS NIH HHS R01 GM085457NIGMS NIH HHS R01GM085457
6 · The paper itself

Abstract

We demonstrate a method to enhance the time resolution of a commercial Coulter counter and enable continuous and long-term cell size measurements for growth rate analyses essential to understanding basic cellular processes, such as cell size regulation and cell cycle progression. Our simple modifications to a commercial Coulter counter create controllable cell culture conditions within the sample compartment and combine temperature control with necessary adaptations to achieve measurement stability over several hours. We also wrote custom software, detailed here, to analyze instrument data files collected by either this continuous method or standard, periodic sampling. We use the continuous method to measure the growth rate of yeast in G1 during a prolonged arrest and, in different samples, the dependency of growth rate on cell size and cell cycle position in arrested and proliferating cells. We also quantify with high time resolution the response of mouse lymphoblast cell culture to drug treatment. This method provides a technique for continuous measurement of cell size that is applicable to a large variety of cell types and greatly expands the set of analysis tools available for the Coulter counter.

Indexed as

Cell CycleAlgorithmsAnimalsCell BiologyCell Line, TumorG1 PhaseMiceModels, BiologicalSaccharomyces cerevisiaeSoftwareSpecies SpecificityTime Factors

Identifiers

PMID22272256
PMCPMC3260162
OpenAlexW1976973482

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.