Evidence map›Paper›PMID 22271746›Full record

ArticlePlant physiology2012

A mutant in the ADH1 gene of Chlamydomonas reinhardtii elicits metabolic restructuring during anaerobiosis.

Leonardo Magneschi, Claudia Catalanotti, Venkataramanan Subramanian, Alexandra Dubini, Wenqiang Yang, Florence Mus, Matthew C Posewitz, Michael Seibert, Pierdomenico Perata, Arthur R Grossman

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Article
  3. Mutation Breeding ofJournal of fungi (Basel, Switzerland) · 2024
    Article
  4. Article
  5. Article
  6. Review
  7. Multiomics resolution of molecular events during a day in the life of Chlamydomonas.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  8. Plant signaling & behavior · 2019
    Article
  9. Article
  10. Article
  11. Metabolite Profiling ofFrontiers in plant science · 2016
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Leonardo MagneschiDepartment of Plant Biology, Carnegie Institution for Science, Stanford, California 94305, USA. magneschi@sssup.it
Claudia Catalanotti
Venkataramanan Subramanian
Alexandra Dubini
Wenqiang Yang
Florence Mus
Matthew C Posewitz
Michael Seibert
Pierdomenico Perata
Arthur R Grossman
Carnegie Institution for Science · USScuola Superiore Sant'Anna · ITColorado School of Mines · USDepartment of Plant Biology · USMontana State University · USNational Renewable Energy Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The green alga Chlamydomonas reinhardtii has numerous genes encoding enzymes that function in fermentative pathways. Among these, the bifunctional alcohol/acetaldehyde dehydrogenase (ADH1), highly homologous to the Escherichia coli AdhE enzyme, is proposed to be a key component of fermentative metabolism. To investigate the physiological role of ADH1 in dark anoxic metabolism, a Chlamydomonas adh1 mutant was generated. We detected no ethanol synthesis in this mutant when it was placed under anoxia; the two other ADH homologs encoded on the Chlamydomonas genome do not appear to participate in ethanol production under our experimental conditions. Pyruvate formate lyase, acetate kinase, and hydrogenase protein levels were similar in wild-type cells and the adh1 mutant, while the mutant had significantly more pyruvate:ferredoxin oxidoreductase. Furthermore, a marked change in metabolite levels (in addition to ethanol) synthesized by the mutant under anoxic conditions was observed; formate levels were reduced, acetate levels were elevated, and the production of CO(2) was significantly reduced, but fermentative H(2) production was unchanged relative to wild-type cells. Of particular interest is the finding that the mutant accumulates high levels of extracellular glycerol, which requires NADH as a substrate for its synthesis. Lactate production is also increased slightly in the mutant relative to the control strain. These findings demonstrate a restructuring of fermentative metabolism in the adh1 mutant in a way that sustains the recycling (oxidation) of NADH and the survival of the mutant (similar to wild-type cell survival) during dark anoxic growth.

Indexed as

Acetate KinaseAcetatesAcetyltransferasesAlcohol DehydrogenaseAnaerobiosisBlotting, WesternCarbon DioxideChlamydomonas reinhardtiiEthanolFermentationFormatesGenes, PlantGlycerolHydrogenLactic AcidMetabolomeAcetate KinaseAcetatesAcetyltransferasesAlcohol DehydrogenaseCarbon DioxideEthanolformate C-acetyltransferaseFormatesformic acidGlycerolHydrogenLactic AcidNADPlant ProteinsPyruvate Synthase

Identifiers

PMID22271746
PMCPMC3291268
OpenAlexW2061687461

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.