Evidence map›Paper›PMID 22268511›Full record

ArticleJournal of forensic sciences2012

A population genetic database of cat breeds developed in coordination with a domestic cat STR multiplex.

Marilyn Menotti-Raymond, Victor A David, Bruce S Weir, Stephen J O'Brien

Open access · greenAbstract read
In one paragraph

Article in Journal of forensic sciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. DNA mutations of the cat: the good, the bad and the ugly.Journal of feline medicine and surgery · 2015
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Marilyn Menotti-RaymondLaboratory of Genomic Diversity, National Cancer Institute-Frederick, Building 560, Room 11-38, Frederick, MD 21702, USA. raymondm@mail.nih.gov
Victor A David
Bruce S Weir
Stephen J O'Brien
Science Applications International Corporation (United States) · USUniversity of Washington · US

Funding

Theoretical Population Genetics SupplementR01GM075091 · NIGMS · UNIVERSITY OF WASHINGTON · PI WEIR, BRUCE S. · 2006 to 2020
$4.7M
NIGMS NIH HHS GM 75091NIGMS NIH HHS R01 GM075091
6 · The paper itself

Abstract

A simple tandem repeat (STR) PCR-based typing system developed for the genetic individualization of domestic cat samples has been used to generate a population genetic database of domestic cat breeds. A panel of 10 tetranucleotide STR loci and a gender-identifying sequence tagged site (STS) were co-amplified in genomic DNA of 1043 individuals representing 38 cat breeds. The STR panel exhibits relatively high heterozygosity in cat breeds, with an average 10-locus heterozygosity of 0.71, which represents an average of 38 breed-specific heterozygosities for the 10-member panel. When the entire set of breed individuals was analyzed as a single population, a heterozygosity of 0.87 was observed. Heterozygosities obtained for the 10 loci range from 0.72 to 0.96. The power for genetic individualization of domestic cat samples of the multiplex is high, with a probability of match (p(m)) of 6.2E-14, using a conservative θ = 0.05.

Indexed as

Databases, Nucleic AcidDNA FingerprintingGenetics, PopulationMicrosatellite RepeatsAnimalsCatsFemaleGene FrequencyGenotypeHeterozygoteMalePolymerase Chain ReactionY Chromosome

Identifiers

PMID22268511
PMCPMC4688040
OpenAlexW1899336105

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.