Evidence map›Paper›PMID 22267201›Full record

SynthesisNature genetics2012

Meta-analyses identify 13 loci associated with age at menopause and highlight DNA repair and immune pathways.

Lisette Stolk, John R B Perry, Daniel I Chasman, Chunyan He, Massimo Mangino, Patrick Sulem, Maja Barbalic, Linda Broer, Enda M Byrne, Florian Ernst and 170 more

Abstract readMeta-Analysis
In one paragraph

Synthesis in Nature genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 206 papers, 15 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
206citing papers in PubMed, 15 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

206 citing papers in PubMed, 15 syntheses or guidelines pooled it.

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  12. Pleiotropic genes for metabolic syndrome and inflammation.Molecular genetics and metabolism · 2014
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146 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

180 authors.

Lisette StolkDepartment of Internal Medicine, Erasmus MC, Rotterdam, The Netherlands.
John R B Perry
Daniel I Chasman
Chunyan He
Massimo Mangino
Patrick Sulem
Maja Barbalic
Linda Broer
Enda M Byrne
Florian Ernst
Tõnu Esko
Nora Franceschini
Daniel F Gudbjartsson
Jouke-Jan Hottenga
Peter Kraft
Patrick F McArdle
Eleonora Porcu
So-Youn Shin
Albert V Smith
Sophie van Wingerden
Guangju Zhai
Wei V Zhuang
Eva Albrecht
Behrooz Z Alizadeh
Thor Aspelund
Stefania Bandinelli
Lovorka Barac Lauc
Jacques S Beckmann
Mladen Boban
Eric Boerwinkle
Frank J Broekmans
Andrea Burri
Harry Campbell
Stephen J Chanock
Constance Chen
Marilyn C Cornelis
Tanguy Corre
Andrea D Coviello
Pio d'Adamo
Gail Davies
Ulf de Faire
Eco J C de Geus
Ian J Deary
George V Z Dedoussis
Panagiotis Deloukas
Shah Ebrahim
Gudny Eiriksdottir
Valur Emilsson
Johan G Eriksson
Bart C J M Fauser
Liana Ferreli
Luigi Ferrucci
Krista Fischer
Aaron R Folsom
Melissa E Garcia
Paolo Gasparini
Christian Gieger
Nicole Glazer
Diederick E Grobbee
Per Hall
Toomas Haller
Susan E Hankinson
Merli Hass
Caroline Hayward
Andrew C Heath
Albert Hofman
Erik Ingelsson
A Cecile J W Janssens
Andrew D Johnson
David Karasik
Sharon L R Kardia
Jules Keyzer
Douglas P Kiel
Ivana Kolcic
Zoltán Kutalik
Jari Lahti
Sandra Lai
Triin Laisk
Joop S E Laven
Debbie A Lawlor
Jianjun Liu
Lorna M Lopez
Yvonne V Louwers
Patrik K E Magnusson
Mara Marongiu
Nicholas G Martin
Irena Martinovic Klaric
Corrado Masciullo
Barbara McKnight
Sarah E Medland
David Melzer
Vincent Mooser
Pau Navarro
Anne B Newman
Dale R Nyholt
N Charlotte Onland-Moret
Aarno Palotie
Guillaume Paré
Alex N Parker
Nancy L Pedersen
Petra H M Peeters
Giorgio Pistis
Andrew S Plump
Ozren Polasek
Victor J M Pop
Bruce M Psaty
Katri Räikkönen
Emil Rehnberg
Jerome I Rotter
Igor Rudan
Cinzia Sala
Andres Salumets
Angelo Scuteri
Andrew Singleton
Jennifer A Smith
Harold Snieder
Nicole Soranzo
Simon N Stacey
John M Starr
Maria G Stathopoulou
Kathleen Stirrups
Ronald P Stolk
Unnur Styrkarsdottir
Yan V Sun
Albert Tenesa
Barbara Thorand
Daniela Toniolo
Laufey Tryggvadottir
Kim Tsui
Sheila Ulivi
Rob M van Dam
Yvonne T van der Schouw
Carla H van Gils
Peter van Nierop
Jacqueline M Vink
Peter M Visscher
Marlies Voorhuis
Gérard Waeber
Henri Wallaschofski
H Erich Wichmann
Elisabeth Widen
Colette J M Wijnands-van Gent
Gonneke Willemsen
James F Wilson
Bruce H R Wolffenbuttel
Alan F Wright
Laura M Yerges-Armstrong
Tatijana Zemunik
Lina Zgaga
M Carola Zillikens
Marek Zygmunt
LifeLines Cohort Study
Alice M Arnold
Dorret I Boomsma
Julie E Buring
Laura Crisponi
Ellen W Demerath
Vilmundur Gudnason
Tamara B Harris
Frank B Hu
David J Hunter
Lenore J Launer
Andres Metspalu
Grant W Montgomery
Ben A Oostra
Paul M Ridker
Serena Sanna
David Schlessinger
Tim D Spector
Kari Stefansson
Elizabeth A Streeten
Unnur Thorsteinsdottir
Manuela Uda
André G Uitterlinden
Cornelia M van Duijn
Henry Völzke
Anna Murray
Joanne M Murabito
Jenny A Visser
Kathryn L Lunetta

Funding

Laboratory of Translational GenomicsZIACP010201 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI PROKUNINA-OLSSON, LIUDMILA · 2010 to 2025
$91.2M
Statistical MethodsP01CA087969 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI TWOROGER, SHELLEY S · 2000 to 2019
$77.8M
UCLA Clinical and Translational Science InstituteUL1TR000124 · NCATS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DUBINETT, STEVEN M. · 2012 to 2015
$57.0M
Transgenic & Knock-out MouseP30DK063491 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PETER J TONTONOZ · 2003 to 2026
$40.4M
Women's Health Study: Continued Follow-upR01CA047988 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI BURING, JULIE E., LEE, I-MIN · 1991 to 2014
$28.2M
Research BaseP30DK072488 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI MITCHELL, BRAXTON D, TAYLOR, SIMEON I. · 2005 to 2019
$17.3M
RISK FACTORS FOR VERTEBRAL FRACTURE AND BONE LOSSR01AR041398 · NIAMS · RHODE ISLAND HOSPITAL (PROVIDENCE, RI) · PI KIEL, DOUGLAS P. · 1991 to 2025
$16.1M
Genome-wide Search for CVD Gene-Environment InteractionsU01HL072515 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI SHULDINER, ALAN R. · 2002 to 2008
$11.2M
Characterizing Genetic Susceptibility to Breast and Prostate Cancer; the BPC3U01CA098233 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI HUNTER, DAVID JOHN · 2003 to 2010
$10.8M
CHARGE Consortium: Omics Discovery for CVD and Aging PhenotypesR01HL105756 · NHLBI · UNIVERSITY OF WASHINGTON · PI Bruce M Psaty, NICHOLAS L SMITH · 2011 to 2026
$9.5M
CLINICAL PROJECT: Age, Gene/Environment Susceptibility Study on the Multi-omics of Aging: A clinical epidemiologic prospective studyZIAAG007380 · NIA · NATIONAL INSTITUTE ON AGING · PI LAUNER, LENORE J · 2009 to 2025
$6.1M
Aging-related Traits and Disease Risk Factors in a Sardinian Population CohortZIAAG000675 · NIA · NATIONAL INSTITUTE ON AGING · PI GOROSPE, MYRIAM · 2009 to 2021
$5.7M
Biotechnology and Biological Sciences Research Council BB/F019394/1Chief Scientist Office CZB/4/710Medical Research Council G0600705Medical Research Council G0700704Medical Research Council MC_PC_U127561128Medical Research Council MC_PC_U127592696Medical Research Council MC_U127561128Medical Research Council MC_U127592696NCATS NIH HHS UL1 TR000124NCI NIH HHS P01 CA087969NCI NIH HHS R01 CA040356NCI NIH HHS R01 CA047988NCI NIH HHS U01 CA098233NHGRI NIH HHS U01 HG004402NHLBI NIH HHS N01 HC025195NHLBI NIH HHS N01 HC035129NHLBI NIH HHS N01 HC055015NHLBI NIH HHS N01 HC085086NHLBI NIH HHS N02 HL064278NHLBI NIH HHS R01 HL043851NHLBI NIH HHS R01 HL087660NHLBI NIH HHS R01 HL105756NHLBI NIH HHS U01 HL072515NHLBI NIH HHS U01 HL084756NIAAA NIH HHS K05 AA017688NIAMS NIH HHS R01 AR041398NIA NIH HHS N01 AG012100NIA NIH HHS N01 AG012109NIA NIH HHS N01 AG050002NIA NIH HHS R21 AG032598NIDDK NIH HHS P30 DK063491NIDDK NIH HHS P30 DK072488The Dunhill Medical Trust R69/0208
6 · The paper itself

Abstract

To newly identify loci for age at natural menopause, we carried out a meta-analysis of 22 genome-wide association studies (GWAS) in 38,968 women of European descent, with replication in up to 14,435 women. In addition to four known loci, we identified 13 loci newly associated with age at natural menopause (at P < 5 × 10(-8)). Candidate genes located at these newly associated loci include genes implicated in DNA repair (EXO1, HELQ, UIMC1, FAM175A, FANCI, TLK1, POLG and PRIM1) and immune function (IL11, NLRP11 and PRRC2A (also known as BAT2)). Gene-set enrichment pathway analyses using the full GWAS data set identified exoDNase, NF-κB signaling and mitochondrial dysfunction as biological processes related to timing of menopause.

Indexed as

Age FactorsDNA-Directed DNA PolymeraseDNA HelicasesDNA Polymerase gammaDNA PrimaseDNA RepairDNA Repair EnzymesExodeoxyribonucleasesFemaleGenetic LociGenome-Wide Association StudyHumansImmunityMenopausePolymorphism, Single NucleotideProteinsDNA-Directed DNA PolymeraseDNA HelicasesDNA Polymerase gammaDNA PrimaseDNA Repair EnzymesEXO1 protein, humanExodeoxyribonucleasesHELQ protein, humanPOLG protein, humanProteinsPRRC2A protein, human

Identifiers

PMID22267201
PMCPMC3288642

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.