Evidence map›Paper›PMID 22262845›Full record

ArticleThe Journal of biological chemistry2012

T cell receptors are structures capable of initiating signaling in the absence of large conformational rearrangements.

Ricardo A Fernandes, David A Shore, Mai T Vuong, Chao Yu, Xueyong Zhu, Selma Pereira-Lopes, Heather Brouwer, Janet A Fennelly, Claire M Jessup, Edward J Evans and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. The TCR Cα Domain Regulates Responses to Self-pMHC Class II.Journal of immunology (Baltimore, Md. : 1950) · 2022
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. HLA-E-restricted, Gag-specific CD8Science immunology · 2021
    Article
  13. Structural understanding of T cell receptor triggering.Cellular & molecular immunology · 2020
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Ricardo A FernandesNuffield Department of Clinical Medicine and Medical Research Council Human Immunology Unit, The University of Oxford, John Radcliffe Hospital, Headington, Oxford OX3 9DU, United Kingdom.
David A Shore
Mai T Vuong
Chao Yu
Xueyong Zhu
Selma Pereira-Lopes
Heather Brouwer
Janet A Fennelly
Claire M Jessup
Edward J Evans
Ian A Wilson
Simon J Davis
Medical Research Council · GBJohn Radcliffe Hospital · GBScripps Research Institute · USUniversity of Oxford · GB

Funding

Structural Basis of T Cell Receptor RecognitionR37AI042266 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI WILSON, IAN A · 2003 to 2012
$5.8M
Structural basis of TLR and NLR recognition and signalingR01AI042266 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI WILSON, IAN A · 1998 to 2017
$3.7M
Medical Research CouncilNIAID NIH HHS AI042266NIAID NIH HHS R01 AI042266NIAID NIH HHS R37 AI042266Wellcome Trust 098274
6 · The paper itself

Abstract

Native and non-native ligands of the T cell receptor (TCR), including antibodies, have been proposed to induce signaling in T cells via intra- or intersubunit conformational rearrangements within the extracellular regions of TCR complexes. We have investigated whether any signatures can be found for such postulated structural changes during TCR triggering induced by antibodies, using crystallographic and mutagenesis-based approaches. The crystal structure of murine CD3ε complexed with the mitogenic anti-CD3ε antibody 2C11 enabled the first direct structural comparisons of antibody-liganded and unliganded forms of CD3ε from a single species, which revealed that antibody binding does not induce any substantial rearrangements within CD3ε. Saturation mutagenesis of surface-exposed CD3ε residues, coupled with assays of antibody-induced signaling by the mutated complexes, suggests a new configuration for the complex within which CD3ε is highly exposed and reveals that no large new CD3ε interfaces are required to form during antibody-induced signaling. The TCR complex therefore appears to be a structure that is capable of initiating intracellular signaling in T cells without substantial structural rearrangements within or between the component subunits. Our findings raise the possibility that signaling by native ligands might also be initiated in the absence of large structural rearrangements in the receptor.

Indexed as

CD3 ComplexReceptors, Antigen, T-CellAnimalsAntibodies, MonoclonalCrystallography, X-RayDimerizationEpitopes, T-LymphocyteHumansImmunoglobulin Fab FragmentsJurkat CellsMiceMutagenesis, Site-DirectedProtein ConformationProtein Structure, TertiarySignal TransductionStructure-Activity RelationshipAntibodies, MonoclonalCD3 antigen, gamma chainCD3 antigen, zeta chainCD3 ComplexCD3delta antigenCd3e protein, mouseEpitopes, T-LymphocyteImmunoglobulin Fab FragmentsReceptors, Antigen, T-Cell

Identifiers

PMID22262845
PMCPMC3339974
OpenAlexW2091813157

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.